Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01672 ATGGGAAAGAAGGGGAGTTGGTTTTCAGCAATCAAGAGAGTTTTCACACACCACTCCAAGGGGAAGGATTCAGATAACAAAAGCACAAAAGAGAAAAAGAAAGGTATAGGAAAACTAAAGCATGGAGAGACCAATTCTTTCATTCCCCTTTTTAGAGAACCAAGCAGCATTGAGAAAATATTTGGGGACTTTGAAAGAGAGCAACAAGTACTTGCAATTAGGCCTCCCACACCTCCTGAGCGACCGAAAACACCGCCTTTTGTCCCTCCTAGAGTTGCTTCTCCTAGGCCTCCTTCACCAAGGGCTGCTTCTCCAAGGGCCGCTTCACCTCGAGTTACCTCTCCAAAAGCTGCGTCTTCTCGGAATGTTCAGCACAACAAGGAGGTTGGTTACAGACCAGAACCAACTTTAAAGAACCAGCATGCCTCGGCTACAAAGATTCAGGCTGCTTACAGAGGTTATATGGCCAGGAGGAGTTTTAGAGCTCTAAAGGGTCTGGTAAGGCTTCAAGGAGTGGTAAGAGGACAGAATGTCAAGAGACAGACAGTTAGTGCCATGAAACACATGCAGCTGTTAGTGCGAGTTCAATCTCAGATTCAATCTCGAAGAATCCAGATGTTGGAAAACCAGGCACGGTATCAAGCCGAGTTCAAGAATGATAAGGATGCTGCAAGTACCTTTGGCAAAATGACTTTAGGAAATGGTTCTGAGGCAGGTAACAATGAAGATTGGGATGATAGCTTACTGACAAAAGAGGAAGTAGAAGCAAGGTTGCAGAGGAAGGTGGAAGCAATCATCAAAAGAGAGAGAGCAATGGCATTTGCATATTCACATCAGTTGTGGAAGGCCTCTCCAAAATCAACTCAAACACCGGTGACAGATACACGATCAAGCGGATTCCCATGGTGGTGGAACTGGCTGGAAAGACAACTACCTGCTGGAACAAATCCACAAGAAAAACAAGTCCTAAAGAATTTTCAACTCACACCACCAAGACCATATTCAGAACAAAAGACAAGTCCAAGACCTGGCTCAAGCACTCAAAGGCAACAACAGCACCATCCATTTTCCTTTGATAACATAGATACACCAAAATCCACAAAATCAACTATATTTCCATCTTCAAAACCAGCTAGAACTCCTCCATTCAGAACTCCACAAACAAACACCTCGAGCATGATGTCAAAACATTCAAGGCCTAGAGCATTAGGAGCCAACTCACCTTTCGATATGCCGCTCAAGGACGACGATAGTCTCATAAGCTGTCCACCATTTTCAGTGCCAAACTACATGGCTTCAACCGTTTCTGCTAAAGCGAAAGTACGCGCTAGCAGTAATCCAAGAGAAAGATTtggtggtagtagtgttggtggtggAACTCCAACTCCAAGCAATGATTCAAAGAGGAGAGTTTCATTCCCTTTATCACAAAGAATAGGGTCATTGTTCTCTAGCAAGGATCCTCATGGCTCTCACAGAACACCAGATAAATATCAGTCATTTGAATCAATAGGAAATGTGAGTGTCGATTCAACAACATCATTGCCAGCAAGAGTTGGAAGAAAACCTTTTACAAGATTTGTGTGA 1587 0.4297 MGKKGSWFSAIKRVFTHHSKGKDSDNKSTKEKKKGIGKLKHGETNSFIPLFREPSSIEKIFGDFEREQQVLAIRPPTPPERPKTPPFVPPRVASPRPPSPRAASPRAASPRVTSPKAASSRNVQHNKEVGYRPEPTLKNQHASATKIQAAYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTVSAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNDKDAASTFGKMTLGNGSEAGNNEDWDDSLLTKEEVEARLQRKVEAIIKRERAMAFAYSHQLWKASPKSTQTPVTDTRSSGFPWWWNWLERQLPAGTNPQEKQVLKNFQLTPPRPYSEQKTSPRPGSSTQRQQQHHPFSFDNIDTPKSTKSTIFPSSKPARTPPFRTPQTNTSSMMSKHSRPRALGANSPFDMPLKDDDSLISCPPFSVPNYMASTVSAKAKVRASSNPRERFGGSSVGGGTPTPSNDSKRRVSFPLSQRIGSLFSSKDPHGSHRTPDKYQSFESIGNVSVDSTTSLPARVGRKPFTRFV 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01672 528 MobiDBLite consensus disorder prediction 442 500 - -
Car06g01672 528 Pfam Protein of unknown function (DUF4005) 386 484 IPR025064 -
Car06g01672 528 MobiDBLite consensus disorder prediction 1 47 - -
Car06g01672 528 ProSiteProfiles IQ motif profile. 140 168 IPR000048 GO:0005515
Car06g01672 528 MobiDBLite consensus disorder prediction 16 40 - -
Car06g01672 528 MobiDBLite consensus disorder prediction 457 488 - -
Car06g01672 528 PANTHER IQ-DOMAIN 5-RELATED 1 525 - -
Car06g01672 528 SMART iq_5 139 161 IPR000048 GO:0005515
Car06g01672 528 MobiDBLite consensus disorder prediction 75 104 - -
Car06g01672 528 MobiDBLite consensus disorder prediction 68 142 - -
Car06g01672 528 MobiDBLite consensus disorder prediction 327 397 - -
Car06g01672 528 MobiDBLite consensus disorder prediction 327 407 - -
Car06g01672 528 Pfam IQ calmodulin-binding motif 141 161 IPR000048 GO:0005515
Car06g01672 528 Gene3D - 120 160 - -
Car06g01672 528 PANTHER IQ-DOMAIN 13 1 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01672 Car-Chr6 16489394 16494264 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01672 1 527 IQD Protein Family AT3G59690 49.649 2.82e-149 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01672 - - gmx:100814804 748.043