Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01665 ATGGATGGAGAAGGAGGAGCTCCGCCTGCTGACACCGTGATGTCGGATGCAGCACCGCCACCTCAGGCGGACCCACAGGTGGCGATGGGGATCGAGAATATTCCGGCAACCCTTAGCCACGGTGGTAGGTTTATCCAATATAACATATTCGGTAATATATTTGAAGTTACTGCGAAATACAAACCACCCATCATGCCAATCGGTAAAGGCGCTTACGGTATTGTTTGCTCTGCTCACAATTCGGAGACAAATGAACATGTCGCCATCAAGAAGATTGCAAATGCATTTGACAACAAAATTGATGCCAAGAGGACCCTTCGTGAAATCAAGCTGCTTCGCCATATGGATCATGAAAACGTGGTCGCAATCAGGGATATAGTGCCACCACCTCAGAGGGAGGTATTTAATGATGTTTACATTGCATATGAGCTAATGGACACTGACCTACACCAAATTATTCGATCAAATCAAGCACTATCCGAGGAGCACTGTCAGTATTTTCTGTACCAAATCCTTCGTGGGTTGAAGTACATACATTCTGCAAATGTTCTGCATAGGGACTTAAAACCGAGCAACCTTCTCCTGAACGCCAACTGTGACTTAAAGATTTGTGATTTTGGACTGGCTCGTGTTACCTCTGAAACAGATTTTATGACTGAATATGTTGTTACAAGATGGTACCGTGCACCAGAGCTTCTGTTAAACTCTTCTGATTACACAGCAGCTATTGATGTATGGTCTGTTGGTTGTATTTTCATGGAACTGATGGATCGAAAGCCTTTGTTTCCTGGCAGAGATCATGTGCATCAGTTACGTCTACTCATGGAGTTGATCGGTACCCCTTCGGAAGCTGATTTGGGGTTTCTGAATGAAAATGCTAAGAGATACATCAGGCAACTACCTCTTTACCGCCGCCAATCTTTCCAAGAAAAGTTTCCACATGTCCATCCCGAAGCTATAGATCTTGTTGAAAAAATGTTAACTTTTGATCCTAGACAAAGAATTACTGTGGAAGATGCACTGGCACACCCATACTTAACATCTCTGCATGACATCAGTGATGAACCTGTGTGCATGACTCCCTTCAGCTTCGACTTTGAACAGCATGCATTGACGGAGGAACAGATGAAAGAATTGATATACAGAGAGGCTTTAGCATTTAACCCTGAGTATCAGCAGTAG 1182 0.4382 MDGEGGAPPADTVMSDAAPPPQADPQVAMGIENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSAHNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEADLGFLNENAKRYIRQLPLYRRQSFQEKFPHVHPEAIDLVEKMLTFDPRQRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQHALTEEQMKELIYREALAFNPEYQQ 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01665 393 Gene3D Phosphorylase Kinase; domain 1 44 383 - -
Car06g01665 393 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 18 391 - -
Car06g01665 393 MobiDBLite consensus disorder prediction 1 25 - -
Car06g01665 393 ProSiteProfiles Protein kinase domain profile. 61 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01665 393 ProSitePatterns MAP kinase signature. 96 199 IPR003527 GO:0004707|GO:0005524|GO:0006468
Car06g01665 393 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 18 391 - -
Car06g01665 393 CDD STKc_TEY_MAPK 54 389 - -
Car06g01665 393 SUPERFAMILY Protein kinase-like (PK-like) 66 354 IPR011009 -
Car06g01665 393 ProSitePatterns Protein kinases ATP-binding region signature. 67 91 IPR017441 GO:0005524
Car06g01665 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Car06g01665 393 Gene3D Transferase(Phosphotransferase) domain 1 145 373 - -
Car06g01665 393 SMART serkin_6 61 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01665 393 Pfam Protein kinase domain 66 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01665 Car-Chr6 16420918 16425434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01665 1 393 MAP Kinase Gene Family AT2G43790 88.608 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Car06g01665 Pkinase 2.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01665 K14512 - gmx:100805830 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01665 06 16420918 16425434 Car06g01665 06 16420918 16425434 ECH
Car01g00427 01 3356971 3361091 Car06g01665 06 16420918 16425434 ECH