Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01650 ATGGGTGACTATGGCGATCACCGAAACACAACTTTCATATTGTTTGTTGACtttgtcgttagatattttgatgtggtattAATCAGGGTTGTCAATGATAGTTACAGAAAAGTCACAAGAATCACCATTGATGTTTACGAAGCCCTTCAACTGGCCAATGTGGATGTTAACTTGGGCCATCTTGATTTATACAATGTTAATAGTGTGGTACCTGGAGAGGGGACCCAATCAAAGAGTTTCATGGCAATTGGAAAAAGCCAAATTAGCACTTCTATTTGGTTTACTTTCTCCACACTGTTCTTTGCTCATAGGGAGAAAATGCATAACAATTTATCTCGTGTAGAGACGGTATCATGGCTCTTTCTAGTTTTGATTCTTAATTCAAGCTACACTGCAAGTCTTTCTTCAATGCTCACAGTTCAACAACTGCAAGCAAATGTCAGAGACATTGAGTGGCTGACATTGAGTGATGGAGATTCATTTGTTAGGACATACCTAGAGAAAGTTGAAAAATTCAAGCCACAGAACATCATAAACATTAGTAATGAAGATAATTATGACACTAAATTCAAAAACAACTCAATTGCTGCTGCTTTTCTAGAACTCCCTTATGTGAAAATTTACATCAGTAAATACTGCAAGGGGTACTATGCCTCTACACCTACCACCAGATTTGGAGGACTTGGATTTCTCTTACAGCAGGGAGAATTGAAGAAATTAGAAGATATATGGTTGAATCCCACAGGTGACTGCCCCTACAATTTGAACTCTAAGAGCACAGAAAGTATGCCTCTTAGAACTTTCTGGGTTCTCTATGTGATTTATGGTGCCACTTCTACTATTTGTTTTCTACTTTCTACCATTGATTCATTAAGATCTAGTCTTAAACTAAAAGATGAGGCACAAGAAAGTATCGACTCCACAGATGATGTAAGCAGATGGAAAAGGGTGGTTAAATTAAGTAGAAAGATTTGTAGCAGAAAACAAAAAAAGCTGGCATTGTAA 1005 0.3642 MGDYGDHRNTTFILFVDFVVRYFDVVLIRVVNDSYRKVTRITIDVYEALQLANVDVNLGHLDLYNVNSVVPGEGTQSKSFMAIGKSQISTSIWFTFSTLFFAHREKMHNNLSRVETVSWLFLVLILNSSYTASLSSMLTVQQLQANVRDIEWLTLSDGDSFVRTYLEKVEKFKPQNIINISNEDNYDTKFKNNSIAAAFLELPYVKIYISKYCKGYYASTPTTRFGGLGFLLQQGELKKLEDIWLNPTGDCPYNLNSKSTESMPLRTFWVLYVIYGATSTICFLLSTIDSLRSSLKLKDEAQESIDSTDDVSRWKRVVKLSRKICSRKQKKLAL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01650 334 Gene3D - 25 178 - -
Car06g01650 334 SUPERFAMILY Periplasmic binding protein-like II 130 248 - -
Car06g01650 334 PANTHER GLUTAMATE RECEPTOR 3.4 59 329 - -
Car06g01650 334 Pfam Ligand-gated ion channel 79 277 IPR001320 GO:0015276|GO:0016020
Car06g01650 334 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 59 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01650 Car-Chr6 16284324 16286730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01650 80 307 Ion Channels AT2G17260 31.373 3.83e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01650 - - cam:105852286 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01650 06 16284324 16286730 Car06g01650 06 16284324 16286730 ECH