Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01647 ATGTCTCTCACTTCTTTGTTTCTTTTCTTCATTTTTTTGACTATAACTTCATCAAGTTTAGGACTACTAATTAGTAGCAATAGCAACACTACACACACACCTCGTCAACTTAGAGTTGATTACTATGCAAAATCTTGTCCACAAATAGAACAACTTGTTGGTTCAGTCACTTCTCAACAATTCAAAGAATCACCTGTTTCTGGTCCTGCCACAATTCGTCTCCTCTTCCATGATTGCTTTGTAGAAGGATGTGATGCATCAATTTTAATAGCATCAAAGCCAGGGAGCAAGGAATTGGCAGAGAAAGATGCTGAGGATAATAGAGATTTGAGAGTGGAAGGTTTTGAGACCATAAAAAAGGCTAAGGAAGTTGTGGAGAAAAAGTGTCCCAATGTAGTTTCATGTGCAGATATTCTAGCAATTGCAGCCAGAGATTTTGTTCACCTTGCAGGAGGGCCATATTACCAAGTGAAGAAGGGAAGATGGGATGGAAAGATATCAATGGCATCAAGGGTAGGGTCCAACATCCCTCGTGCAAACTCAACCATTGATGAGCTCATCAAACTCTTCAACTCAAAAGGCTTAACCATACAGGATATGGTTGCTCTTTCGGGTGCTCATACAATCGGGTTCGCTCATTGCAAGAATTTTGTGACCCGTCTCTACAATTATCGAGGCAAGGGTCAACCTGATCCGAATATGAACCCTAAACTGTTGAATGCTCTTAGAATGTACTGTCCAAACTTTGGTGGAAACTCAGATATTGTTGCCCCATTTGATGCTACTACCCCTTTCATATTTGACCATGCATATTATGGTAACTTGCAGAACAAGATGGGTTTGCTTGCATCTGATCAGGCTTTGGCTTTGGACCCACGAACCATGTCACTGGTTCAAGATTTTTCAAAGGACAAGCAGAAGTTTTTTCAAGCATTCGCAGCTGCTATAGATAAAATGAGTTTACTGAAAGTTGTGAGAGGGAAAAAGCATGGGGAGAAAAGAAGAGATTGTAGCATGCATATGTGA 1026 0.4055 MSLTSLFLFFIFLTITSSSLGLLISSNSNTTHTPRQLRVDYYAKSCPQIEQLVGSVTSQQFKESPVSGPATIRLLFHDCFVEGCDASILIASKPGSKELAEKDAEDNRDLRVEGFETIKKAKEVVEKKCPNVVSCADILAIAARDFVHLAGGPYYQVKKGRWDGKISMASRVGSNIPRANSTIDELIKLFNSKGLTIQDMVALSGAHTIGFAHCKNFVTRLYNYRGKGQPDPNMNPKLLNALRMYCPNFGGNSDIVAPFDATTPFIFDHAYYGNLQNKMGLLASDQALALDPRTMSLVQDFSKDKQKFFQAFAAAIDKMSLLKVVRGKKHGEKRRDCSMHM 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01647 341 ProSiteProfiles Plant heme peroxidase family profile. 36 341 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g01647 341 CDD secretory_peroxidase 36 338 IPR033905 GO:0004601|GO:0042744
Car06g01647 341 PANTHER PEROXIDASE 19 25 337 - -
Car06g01647 341 PANTHER PEROXIDASE 25-RELATED 25 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g01647 341 ProSitePatterns Peroxidases proximal heme-ligand signature. 199 209 IPR019793 -
Car06g01647 341 PRINTS Plant peroxidase signature 46 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g01647 341 PRINTS Plant peroxidase signature 70 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g01647 341 PRINTS Plant peroxidase signature 113 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g01647 341 PRINTS Plant peroxidase signature 132 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g01647 341 PRINTS Plant peroxidase signature 151 166 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g01647 341 PRINTS Plant peroxidase signature 198 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g01647 341 PRINTS Plant peroxidase signature 258 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g01647 341 PRINTS Plant peroxidase signature 274 291 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g01647 341 PRINTS Plant peroxidase signature 314 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g01647 341 SUPERFAMILY Heme-dependent peroxidases 36 339 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car06g01647 341 PRINTS Haem peroxidase superfamily signature 68 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g01647 341 PRINTS Haem peroxidase superfamily signature 133 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g01647 341 PRINTS Haem peroxidase superfamily signature 151 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g01647 341 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g01647 341 PRINTS Haem peroxidase superfamily signature 260 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g01647 341 ProSitePatterns Peroxidases active site signature. 68 79 IPR019794 GO:0004601
Car06g01647 341 Gene3D Peroxidase, domain 2 177 319 - -
Car06g01647 341 Gene3D - 40 339 - -
Car06g01647 341 Pfam Peroxidase 56 304 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01647 Car-Chr6 16268188 16271013 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01647 1 341 Peroxidase AT2G34060 61.383 2.53e-159 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01647 K00430 - gmx:100777463 544.273