Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01643 ATGGCAAAACGGAACAAACCATGGAATGGAAGCAACACAAGTAACCCTGCATGCGCTGCTTGCAGACACCAACGGAGAAAATGCACTCAAGACTGTGTTCTTGCACCTTATTTTCCAATAGACAAGATTCATGTATATGAATCAGTTCACAAGGTTTTTGGTTTCAGCAACGTTGCAAAGATGCTAACAAAACTTGATCAACAAGGTAGAAAACAAGCCATCAAATCTTTTGAATGGGAAGCCATGATGTGGGCCCAAAATCCTGTCTTTGGTCCATTTGGTGCTTACAATGAAGCCTTGAACATTATCACACAACTATTGACTCTCCTCCAACAGCAACAAACTTTTTCAACTTCTGAGCCCAAATTTAGGGGCCAGGCCCATGATTCATTACTCTTTAGTAATGAGGCTTTACAAGTTTCCAACAATGTCAATTGGGCACCTTTTGTGGATAATAACAATGTTGTACAAAATAATCCTAGTTTTTCATATCCATATGTACATAGTTTTGAAGGTGATTTGCATAATGTGGAACCAAAAATATTCAATTGTGTTCCTGATGCTAATGTTTTTTTGCACCAAAAGAGTGCAATTTTGCAGCCCAATTATTTTCAAAACATAGCAAGTGTTTCTGGGAGTAATAATAATGTAGTGACTTCTTCAACAATTGATCAACAAAGTCAAGTTAGAGATTTTCAATGTTATGATGGCAATGTTGAAAATATTTACAAAACTAAGGGGTATGGACGAGAGTATGCAGCAGTAGTTCAAAAGAGTGAGAAGAGTATAGTTGATCACACCATGGCACAAAATAGAGCAAGGAGCAAAATTGAAGAATTTCAACATCCTATTTATTATTCTGTTGGAAATTCCAGACCTAAGCAAGAGTAA 891 0.3681 MAKRNKPWNGSNTSNPACAACRHQRRKCTQDCVLAPYFPIDKIHVYESVHKVFGFSNVAKMLTKLDQQGRKQAIKSFEWEAMMWAQNPVFGPFGAYNEALNIITQLLTLLQQQQTFSTSEPKFRGQAHDSLLFSNEALQVSNNVNWAPFVDNNNVVQNNPSFSYPYVHSFEGDLHNVEPKIFNCVPDANVFLHQKSAILQPNYFQNIASVSGSNNNVVTSSTIDQQSQVRDFQCYDGNVENIYKTKGYGREYAAVVQKSEKSIVDHTMAQNRARSKIEEFQHPIYYSVGNSRPKQE 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01643 296 Pfam Lateral organ boundaries (LOB) domain 17 111 IPR004883 -
Car06g01643 296 ProSiteProfiles LOB domain profile. 16 117 IPR004883 -
Car06g01643 296 PANTHER LOB DOMAIN-CONTAINING PROTEIN 2 11 223 - -
Car06g01643 296 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01643 Car-Chr6 16234212 16235102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01643 18 112 AS2 family AT3G50510 47.368 1.24e-23 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car06g01643 LOB 3.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01643 - - cam:101500246 583.948