Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01633 ATGGGTTCCGAGAATGTATACAAATCAAATGAGCTCTTTGAAGCTCAAACTCATTTGTACAATCACATTCTTAGCTTCCTCAAACCCATGTCCATTAAATGGGCTGTTGAACTTGGAATACCAGATATCATACACAATCATGGCCAACCCATTACTCTTCCTCAACTTCTCTCTGTTCTTCAAATTCATGAAGACAAATCTTCTCTTGTCAAGAGCCTCATGCGTTTATTGGCACACAATAACTTTTTCAGAATTGTGAAAACAGAAGGAAAAGAAGCATACGCTCTTTCCCCACCTTCAGAGCTTCTTGTCAAAGACACTGACCATTGTTTATCTTCAATGGTTAATTTGTTAACTAACCCAAATGTAGTTAATTTGTATAATCATTTGGGTAAATGGACTTTTGGGGAAAAGTCATCAATCTTTGAGAATACATCAGACACAGGAGATTATTGGGGTTTTGTTCATCAAAATCCAAAAAGTTTGAAGTCATTCAATGAGGCTATGGAAAGTGATTCTCATGTGGTGAGGTTGGCTTTGAAAGATTGCAAGTCTATTTTTGAAAGTTTGGATTGTTTGGTTGATGTTGGAGGTGGAACTGGAAATACAGCTAAAATTATATGTGAGACATTTCCTATGTTAAAATGCACTGTCTTGGACCTTCCACAAGTTATAGCAGGCTTACCAACAAATAATAAAAATTTGAGTTTTGTTGGTGGAGACATGTTTGAATCTATCCCTGAGGCTGATGCAGTTTTATTAAAGTGGATTTTACACGACTGGAATGATGATGACTGTGTCAAGATACTCCAAAATTGTAAAAAAGCTGTTTCAAGAAAAGGCAAAGGAGGAAAAGTGGTCATAATAGATATTGTGATAAATGAAAAGCAAGATAAGCATGAAATGACAGAAGTGAAGCTCTTCTTTGATATAGTTATGATGGCTAGTTTTAATGGAAAAGAAAGAGATGGGAAAAACTGGAATGAAATCATCATGAAAGCAGGGTTCACACGCTACAAAATATTTCCCATATTTGGTTTTAGGTCACTTATTGAGGTTTATGTTTAG 1068 0.3558 MGSENVYKSNELFEAQTHLYNHILSFLKPMSIKWAVELGIPDIIHNHGQPITLPQLLSVLQIHEDKSSLVKSLMRLLAHNNFFRIVKTEGKEAYALSPPSELLVKDTDHCLSSMVNLLTNPNVVNLYNHLGKWTFGEKSSIFENTSDTGDYWGFVHQNPKSLKSFNEAMESDSHVVRLALKDCKSIFESLDCLVDVGGGTGNTAKIICETFPMLKCTVLDLPQVIAGLPTNNKNLSFVGGDMFESIPEADAVLLKWILHDWNDDDCVKILQNCKKAVSRKGKGGKVVIIDIVINEKQDKHEMTEVKLFFDIVMMASFNGKERDGKNWNEIIMKAGFTRYKIFPIFGFRSLIEVYV 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01633 355 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Car06g01633 355 Gene3D Vaccinia Virus protein VP39 104 355 IPR029063 -
Car06g01633 355 Pfam O-methyltransferase domain 127 336 IPR001077 GO:0008171
Car06g01633 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 354 IPR029063 -
Car06g01633 355 PANTHER O-METHYLTRANSFERASE 5 354 IPR016461 GO:0008168
Car06g01633 355 Gene3D - 2 103 IPR036388 -
Car06g01633 355 SUPERFAMILY "Winged helix" DNA-binding domain 9 107 IPR036390 -
Car06g01633 355 PIRSF O-mtase 1 355 IPR016461 GO:0008168
Car06g01633 355 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 5 354 - -
Car06g01633 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 355 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01633 Car-Chr6 16156070 16157782 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01633 29 341 Monolignol Biosynthesis Gene Families AT5G54160 30.154 2.32e-40 144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01633 06 16156070 16157782 Car06g01633 06 16156070 16157782 ECH