Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01630 ATGGATTTCAATAGCAACGGTTCTGAAGAAAATGAACTGTACCGTGCTCAGATCCATTTATACAAACATGTATACAACTTTGTAAGCTCCATGGCACTGAAATCTGTGATGGAACTAGGCATAGCAGATGTAATCGACAACCATGGAAAACCCATGACTCTTAACGAATTAGCCACATCTTTGAAACTCCACCCTTCTAAAGTTAACATCCTCCATCGTTTCTTACGCCTATTAACATACAATGGTTTCTTTGTTAAAACAACAGTGAATGCCAAAGAAGGTGGAGAAGGAGAAATAGCATATTCTCTCACACCTCCTTCAAAGCTTCTTGTGAGTGGAAAATCAACATGTTTAGCACCAATTGTTAAAGGAGCGCTTCATCCAAGTTCTCTTGACATGTGGAGTGCTTCTAAGCAATGGTTCAATGAGGATAAGGAACAAACCCTGTTTGAGAGCGCAACAGGGGAGAGCTTTTGGGACTTTCTTAACAAACAATCTGATACTTTGAGTATGTTTCAAGATGCTATGGCATCTGATTCTAGAATGTTTGAGCTTGCTCTTCAAGAGAACAAACATGTCTTTGAGGGTTTGGAGTCTCTTGTTGATGTTGGAGGTGGAACTGGTGGTGTCACTAAACTCATCAATAAAGCTTTTCCTCACCTTAAATGCACTGTTTTTGATCAACCGCAGGTTGTTGGTAACTTAACTGGAACTGAAAATTTGAACTTTGTTGGCGGAGATATGTTCAAGTCTATTCCTCCTGCAGATGCTGTTTTACTCAAGTGGGTTCTACACGATTGGAATGATGAACAATCTTTGAAGATATTGAAGAACAGTAAAGAAGCTATTTCTGGCAAAGGGAAAGATGGAAAAGTGATTATCATCGACATATCAATCGATGAAACAAGTGATGATCGTGAATTAACTGGGTTGCAATTGGACTATGATTTGGTGATGCTGACAATGTTCCTTGGAaaagaaagagaaaagaaagaatgggagaaaCTTATTTACGATGCTGGTTTCAGTAGTTACAAAATTAGAACCATAAGTGGCTTTAAGTCCATCATTGAAGTTTTTCCTTAA 1086 0.3766 MDFNSNGSEENELYRAQIHLYKHVYNFVSSMALKSVMELGIADVIDNHGKPMTLNELATSLKLHPSKVNILHRFLRLLTYNGFFVKTTVNAKEGGEGEIAYSLTPPSKLLVSGKSTCLAPIVKGALHPSSLDMWSASKQWFNEDKEQTLFESATGESFWDFLNKQSDTLSMFQDAMASDSRMFELALQENKHVFEGLESLVDVGGGTGGVTKLINKAFPHLKCTVFDQPQVVGNLTGTENLNFVGGDMFKSIPPADAVLLKWVLHDWNDEQSLKILKNSKEAISGKGKDGKVIIIDISIDETSDDRELTGLQLDYDLVMLTMFLGKEREKKEWEKLIYDAGFSSYKIRTISGFKSIIEVFP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01630 361 PANTHER O-METHYLTRANSFERASE 5 361 IPR016461 GO:0008168
Car06g01630 361 Gene3D - 2 110 IPR036388 -
Car06g01630 361 SUPERFAMILY "Winged helix" DNA-binding domain 10 114 IPR036390 -
Car06g01630 361 Pfam O-methyltransferase domain 134 343 IPR001077 GO:0008171
Car06g01630 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Car06g01630 361 Gene3D Vaccinia Virus protein VP39 111 361 IPR029063 -
Car06g01630 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 361 IPR016461 GO:0008168
Car06g01630 361 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 5 361 - -
Car06g01630 361 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Car06g01630 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 359 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01630 Car-Chr6 16129999 16132537 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01630 28 360 Monolignol Biosynthesis Gene Families AT5G54160 34.582 8.24e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01630 - K22588 ag:AAY18581 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01630 06 16129999 16132537 Car06g01630 06 16129999 16132537 ECH