Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01628 ATGGATTTCAGTAGCAATGAGAGTGAAGAAAGTGAATTGTATCATGCTCAAATCCATTTATACAAACACTTATACAGTTTTATAAGCTCTGCTGCTCTCAAATCTGCTGTGGAACTTGGCATAGCAGATGCAATCCACAACCATGGAAAACCAATGACTCTTAATGAATTAGCTTCATCTTTGAAACTTCACCCTTCTAAAGTTAATATTCTCTATCGTTTCTTACGTCTTTTAACACACAATGGTTTTTTTGTAAAAACAACAGTGATGAAAGGGGAAGAAGAAGAAACAGCATATTCTCTTACACCTCCTTCAAAGCTTCTCATTAGTGGCAAACAAACATGTTTATCATCAATGGTTAAGGGAACACTTCAACCAATGCCTCTTGACATGTGGCACTCTTCCAACAAATGGTTCAATGAGGAAAAGGAACAAACCCTGTTTGAGAGTGCAACAGGGGAGAACTTTTGGAACTTTCTGAACAAAGATTCTGAATCTGATAAACTGAATATGTTTCAAGATGCTATGGCAGCTGATTCTCAAATTTTTAAGATTGCACTCAAAGACTGTAAGCATGTTTTTGAGGGTGTAGAGTCTCTTGTTGATGTTGGAGGTGGAACTGGTGCTGTCACAAAACTCATCAATGAAGCTTTTCCTAACATCAAATGCACTGTTTTTGACCAACCACAAGTTGTGGGTAACTTAACTGGAACTCAAAATTTAAACTTTGTTGGTGGAGATATGTTCAAGTCTATTCCTCCAGCCGACGCTGTTTTACTTAAGTGGGTTTTGCATGATTGGGATGATGAACAATCCTTAAAGATATTGAAGAATAGCAAAGAAGCTATTTCTGGAAAAGGGAAAGGAGGAAAGGTGATTATCATTGACATATCAATTGATGAAATAAGTGACAATCGCATAATTACTGAGTTGCAATTGGACTTTGACTTCATGATGATGACTTTATTCAATGGAaaagaaagagagaagaaagaatgggagaaaCTCATTTTCAACGCTGGCTTTAGCAGCTACAAGATCACCCCTATATGCAGCTTCAAGTCTCTCATTGAAGTTTATCCTTGA 1086 0.361 MDFSSNESEESELYHAQIHLYKHLYSFISSAALKSAVELGIADAIHNHGKPMTLNELASSLKLHPSKVNILYRFLRLLTHNGFFVKTTVMKGEEEETAYSLTPPSKLLISGKQTCLSSMVKGTLQPMPLDMWHSSNKWFNEEKEQTLFESATGENFWNFLNKDSESDKLNMFQDAMAADSQIFKIALKDCKHVFEGVESLVDVGGGTGAVTKLINEAFPNIKCTVFDQPQVVGNLTGTQNLNFVGGDMFKSIPPADAVLLKWVLHDWDDEQSLKILKNSKEAISGKGKGGKVIIIDISIDEISDNRIITELQLDFDFMMMTLFNGKEREKKEWEKLIFNAGFSSYKITPICSFKSLIEVYP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01628 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Car06g01628 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 361 IPR016461 GO:0008168
Car06g01628 361 Gene3D - 2 108 IPR036388 -
Car06g01628 361 Gene3D Vaccinia Virus protein VP39 109 361 IPR029063 -
Car06g01628 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 360 IPR029063 -
Car06g01628 361 Pfam O-methyltransferase domain 132 343 IPR001077 GO:0008171
Car06g01628 361 PANTHER O-METHYLTRANSFERASE 5 361 IPR016461 GO:0008168
Car06g01628 361 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 5 361 - -
Car06g01628 361 Pfam Dimerisation domain 32 79 IPR012967 GO:0046983
Car06g01628 361 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01628 Car-Chr6 16098721 16100421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01628 32 348 Monolignol Biosynthesis Gene Families AT5G54160 32.931 4.08e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01628 K22588 - ag:AAY18581 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01628 06 16098721 16100421 Car06g01628 06 16098721 16100421 ECH