Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01622 ATGACATGGTGCAATGACTCAGATGATCAAGATAGAGGCATTCAACTAATAACTTCCACTTTTATTCGTAGAATTGTTAGCAATGAAACTGATCTTGTTACTCATGACACAAAATTACCAACTCAAATTCGAACCTTAACTTGCCCCTCATGTGGTCATAACATTCAATTCCAAGATCAGGGTGGAATAAATGATTTGCCGGGGTTACCAGCTGGAGTGAAGTTTGATCCGAATGATCAAGAGATACTACAACATTTGGAAGCAAAGATTATGTTTGATGTGCCTAAACTTCATCCTCTTATTGATGAGTTCATACCAACACTTGAAGGAGAGAATGGAATTTGTTATACACATCCAGAAAAGCTACCAGGTGTAAGCAAAGATGGACAAATCCGTCATTTCTTTCACCGGCCTTCAAAAGCTTACACAACAGGAACAAGGAAAAGAAGAAAGGTTCAAACCGATGAAGAAGGAAGTGAAACAAGATGGCACAAAACAGGGAAAACAAGACCAATTTTTATTAGTGGTGTTATGAAAGGTTTCAAAAAGATACTAGTCCTTTATACTAACTATGGTAGACAAAAGAAGCCTGAAAAAACTAATTGGGTAATGCATCAATACCACCTTGGCAATAATGAAGAAGAGAAAGATGGAGAATTAGTTGTTTCAAAAGTTTTCTACCAAACACAACCAAGACAATGTGGTAATAGTAATTCCATTATGAAGGATACTTATGAAAATAGAATGAGTGAAAGAAATGTCCAAGATGATGACAATATAGTATCTAAAAATGTGGTTCCTACTATGGATTACTATAATTGTGATCCTTTCATGAATTATGAACATGTTGGTCATAATTTGGAAAGCTCACCACAACTTATTTCGAACTTGGTTATGCAAGGTGATGATGGCTCTTCTTTTATTCGATTAGCAATGGATGCAAACAAAGCCAGGTTGGACAGAAATTAG 969 0.3581 MTWCNDSDDQDRGIQLITSTFIRRIVSNETDLVTHDTKLPTQIRTLTCPSCGHNIQFQDQGGINDLPGLPAGVKFDPNDQEILQHLEAKIMFDVPKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVQTDEEGSETRWHKTGKTRPIFISGVMKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFYQTQPRQCGNSNSIMKDTYENRMSERNVQDDDNIVSKNVVPTMDYYNCDPFMNYEHVGHNLESSPQLISNLVMQGDDGSSFIRLAMDANKARLDRN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01622 322 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 303 - -
Car06g01622 322 Pfam No apical meristem (NAM) protein 70 209 IPR003441 GO:0003677|GO:0006355
Car06g01622 322 MobiDBLite consensus disorder prediction 142 164 - -
Car06g01622 322 MobiDBLite consensus disorder prediction 148 164 - -
Car06g01622 322 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 303 IPR044799 GO:0003700
Car06g01622 322 ProSiteProfiles NAC domain profile. 69 228 IPR003441 GO:0003677|GO:0006355
Car06g01622 322 Gene3D NAC domain 78 232 IPR036093 GO:0003677|GO:0006355
Car06g01622 322 SUPERFAMILY NAC domain 65 228 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01622 Car-Chr6 16039707 16043960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01622 1 318 NAC Transcription Factor Family AT1G28470 58.716 1.43e-124 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car06g01622 NAM 6.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01622 - - gmx:100783888 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01622 06 16039707 16043960 Car06g01622 06 16039707 16043960 ECH
Car01g00358 01 2800797 2804133 Car06g01622 06 16039707 16043960 ECH