Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01621 ATGCTGAAACAAGTCCCATTAATTTGCATTGTTCTATCACTCTATGCTCTTGCAACAACCGTAGCATCTCTAAACCAAGAAGGGTTGTACCTGTACCAATTCAAACTGACCTTAGAAGATCCCGACTCACGTTTATCCTCATGGAACCCAACAGACACCACACCTTGCAACTGGTATGGTGTACGTTGCGACTCCACTAACACCTCCGTAACGGAACTCGACCTTTCCGACACAAACATTCAAGGTCCATTCACGGCGTCAATTCTCTGCCGTCTCCCTAACCTCTCCTCCATCAACTTCTTCAATAACTCCATTAACCAAACCTTCCCTCTCAAAATCAACCTCTGTAACAACCTCGTTCACCTCGACCTCTCTCAGAATCTCCTCACTGGTCCTCTCCCTGAAACTCTCTCCCTTCTCCCTAACCTCCGTTACCTCGACCTCACCGGTAACAACTTCTCTGGTCCCATTCCTTTCTCCTTCGGAACGTTCCAGAAACTCGAAGTTCTCTCACTCGTTTCGAATCTTCTAGAAGGTACTATACCTCCTTCTCTTGGTAACCTCACTACTTTGAAAATGCTTAACCTCTCTTACAACCCGTTCTTCCCGGGTCGGATCCCTTCGGAACTTGGGAATTTAACTAACCTTGAGGTTCTATGGTTAACACAATGTAACCTCGTTGGTTTGATTCCTGACTCACTTGGGAAACTTAAGAAGCTTAAGGATTTGGACCTTGCGTTAAACGATTTATACGGTTCTATACCGAGTTCGCTCACTGAGTTAACTAGTTTGAGACAGATTGAGTTGTATAATAACTCGTTATCTGGTGAGTTGCCTCGGGGAATGGGGAACCTTACTTCGTTGAGGCTTCTTGACGCGTCAATGAATCATTTGACGGGGAGTATTCCGGTGGAGCTTTGTTCGTTGCCGCTTGAGAGTCTCAATCTCTATGAGAATCGTTTTGAGGGTGAGTTACCGGCGAGTATTGCTGACTCGCCGAATCTTTACGAGTTGAGGTTGTTTGGAAACCGACTAACCGGAAAGTTGCCGGAAAATCTCGGGAAACGTTCTCCTCTGAGGTGGCTTGATGTTTCGAGTAACCAGTTTTGGGGAAGCATTCCGGCGAGTTTGTGTGATCTTGGTGAGTTGGAGGAGCTTCTTATGATTTATAATTTGTTCACCGGTGAGATTCCAGCGAGTCTGGGAACGTGTCAGAGCTTGACGCGTGTACGTCTCGGTTATAACCGGTTTTCCGGTGAGGTTCCGGCGGGGATCTGGGGTCTTCCCCATGTGAATCTGTTAGAACTTGCTCATAACTCGTTTACCGGTTCTATTTCGAAGACCATTGCCGGTGCGGGGAACCTTTCGTTGTTGATTTTGTCGGAGAACAATTTTTCCGGAACGGTTCCTGATGAGATTGGGTGGGTGGAAAATCTCGTCGAGTTTTCTGCCGGTGATAACATGTTCACCGGCTCTCTTCCCGATAGTATAGTGAATCTTGGGCAGCTTGGGATTCTTGATTTTCATAACAATAAACTCTCTGGTGAAATGCCAAAGGGGATTGGTTCTTGGAAGAAGCTTAATGATTTGAATTTGGCCAACAATGAAATTGGTGGAAAAATTCCTGATGAGATTGGGAGTTTATCTGTACTTAATTTTCTTGATCTTTCTAAGAATCAGTTTTCTGGGAAAATCCCTCACGGGTTGCAGAATCTAAAGCTGAATCAGCTCAATTTGTCATATAATCGTCTTTCTGGTGAACTTCCTCCTCAATTGGCTAAGGAAATGTACAGGTCTAGTTTTGTTGGCAATCCTGGTTTGTGTGGTGATTTGAAAGGTTTGTGTGAAAGTAGGAATGAAGTGAAGAACTTGGGTTATGTTTGGTTGCTTAGAACAATTTTCGTTGTTACCATTTTTGTGTTCCTAGTTGGTGTTGTCTGGTTTTACTTTAGGTACAAAAATTTCAAGGAAGCGAAAAAAGCTTTTGATAAATCAAAATGGACTTTGATGTCGTTTCATAAACTGGGTTTTGGCGAAGATGAGATTTTGAATTGTCTTGATGAAGATAATGTCATTGGAAGTGGTTCTTCTGGGAAGGTTTACAAGGTTGTACTTGGCAGTGGAGAAGCTGTTGCTGTGAAGAAGATATGGGGAGGGGTTAAAAAGGAAGTGGAGAGTGGAGATGTTGAAAAGGGTAGGGTTCAAGACAATGCTTTTGATGCAGAGGTTGAAACTCTTGGAAAAATTAGACACAAGAACATTGTGAAGCTATGGTGTTGCTGCACCACTAGGGATTGCCAGCTTTTGGTTTATGAGTATATGCCAAATGGTAGTCTTGGTGATTTGCTTCATAGTACTAAAGGAGGGTTGTTGTTGGATTGGCCAACAAGATACAAGATAGCTGTTGATGCTGCTGATGGACTATCTTATCTTCATCACGATTGTGTTCCACCAATTGTTCATAGAGATGTTAAATCTAACAATATCTTGTTGGATGGAGACTTTGGTGCAAGGGTTGCAGATTTTGGACTAGCTAAGGTTGTCGAAACCACCGGGAAAGGAATTAAATCCATGTCCATCATAGCTGGGTCTTGTGGGTATATTGCACCAGAATATGCATACACGCTTAGAGTGAATGAGAAGAGCGATATCTATAGTTTTGGTGTTGTCATACTTGAACTAGTTACTGGAAGACGTCCCGTGGATCCTGAATTTGGAGAGAAAGATTTGGTTAAATGGGTTTGCACTACCTTAGATCAAAAGGGTGTGGACCATGTACTTGACTCAAGGCTTGATTCATGTTTCAAAGAAGAAATTTGCAAAGTGTTCAACATTGGTCTCATGTGCACTAGTCCTCTTCCAATCAACCGGCCTTCAATGAGAAGAGTGGTGAAAATGTTGCAAGAGGTAGGAACAGAGAAACAAACGAAACCTGCCAAGAAAGACGGAAAACTGTCCCCTTATTACTATGATGATGCCTCAGATCATGGAAGTGTTGTTTGA 3003 0.4319 MLKQVPLICIVLSLYALATTVASLNQEGLYLYQFKLTLEDPDSRLSSWNPTDTTPCNWYGVRCDSTNTSVTELDLSDTNIQGPFTASILCRLPNLSSINFFNNSINQTFPLKINLCNNLVHLDLSQNLLTGPLPETLSLLPNLRYLDLTGNNFSGPIPFSFGTFQKLEVLSLVSNLLEGTIPPSLGNLTTLKMLNLSYNPFFPGRIPSELGNLTNLEVLWLTQCNLVGLIPDSLGKLKKLKDLDLALNDLYGSIPSSLTELTSLRQIELYNNSLSGELPRGMGNLTSLRLLDASMNHLTGSIPVELCSLPLESLNLYENRFEGELPASIADSPNLYELRLFGNRLTGKLPENLGKRSPLRWLDVSSNQFWGSIPASLCDLGELEELLMIYNLFTGEIPASLGTCQSLTRVRLGYNRFSGEVPAGIWGLPHVNLLELAHNSFTGSISKTIAGAGNLSLLILSENNFSGTVPDEIGWVENLVEFSAGDNMFTGSLPDSIVNLGQLGILDFHNNKLSGEMPKGIGSWKKLNDLNLANNEIGGKIPDEIGSLSVLNFLDLSKNQFSGKIPHGLQNLKLNQLNLSYNRLSGELPPQLAKEMYRSSFVGNPGLCGDLKGLCESRNEVKNLGYVWLLRTIFVVTIFVFLVGVVWFYFRYKNFKEAKKAFDKSKWTLMSFHKLGFGEDEILNCLDEDNVIGSGSSGKVYKVVLGSGEAVAVKKIWGGVKKEVESGDVEKGRVQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCQLLVYEYMPNGSLGDLLHSTKGGLLLDWPTRYKIAVDAADGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARVADFGLAKVVETTGKGIKSMSIIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRRPVDPEFGEKDLVKWVCTTLDQKGVDHVLDSRLDSCFKEEICKVFNIGLMCTSPLPINRPSMRRVVKMLQEVGTEKQTKPAKKDGKLSPYYYDDASDHGSVV 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01621 1000 SMART serkin_6 686 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01621 1000 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Car06g01621 1000 PANTHER LRR RECEPTOR-LIKE KINASE 5 982 - -
Car06g01621 1000 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 982 - -
Car06g01621 1000 ProSitePatterns Serine/Threonine protein kinases active-site signature. 819 831 IPR008271 GO:0004672|GO:0006468
Car06g01621 1000 Gene3D Phosphorylase Kinase; domain 1 649 773 - -
Car06g01621 1000 MobiDBLite consensus disorder prediction 974 1000 - -
Car06g01621 1000 SUPERFAMILY RNI-like 349 589 - -
Car06g01621 1000 SUPERFAMILY L domain-like 25 201 - -
Car06g01621 1000 SMART LRR_typ_2 380 404 IPR003591 -
Car06g01621 1000 SMART LRR_typ_2 261 284 IPR003591 -
Car06g01621 1000 SMART LRR_typ_2 164 188 IPR003591 -
Car06g01621 1000 SMART LRR_typ_2 285 309 IPR003591 -
Car06g01621 1000 SMART LRR_typ_2 140 163 IPR003591 -
Car06g01621 1000 SMART LRR_typ_2 213 236 IPR003591 -
Car06g01621 1000 SMART LRR_typ_2 500 524 IPR003591 -
Car06g01621 1000 SMART LRR_typ_2 548 571 IPR003591 -
Car06g01621 1000 Gene3D Ribonuclease Inhibitor 24 178 IPR032675 -
Car06g01621 1000 Gene3D Ribonuclease Inhibitor 281 373 IPR032675 -
Car06g01621 1000 Gene3D Ribonuclease Inhibitor 179 280 IPR032675 -
Car06g01621 1000 SUPERFAMILY Protein kinase-like (PK-like) 682 967 IPR011009 -
Car06g01621 1000 Gene3D Transferase(Phosphotransferase) domain 1 774 993 - -
Car06g01621 1000 Pfam Leucine Rich Repeat 142 162 IPR001611 GO:0005515
Car06g01621 1000 Pfam Leucine Rich Repeat 215 237 IPR001611 GO:0005515
Car06g01621 1000 MobiDBLite consensus disorder prediction 974 989 - -
Car06g01621 1000 SUPERFAMILY L domain-like 161 422 - -
Car06g01621 1000 ProSitePatterns Protein kinases ATP-binding region signature. 692 715 IPR017441 GO:0005524
Car06g01621 1000 ProSiteProfiles Protein kinase domain profile. 686 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01621 1000 Pfam Protein kinase domain 688 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01621 1000 Gene3D Ribonuclease Inhibitor 374 615 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01621 Car-Chr6 16008587 16012700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01621 20 1000 Receptor kinase-like Gene Family AT1G28440 71.255 0.0 1429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car06g01621 Pkinase 7.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01621 - - gmx:100819887 1716.44