Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01619 ATGGAGTCGCGAGTGTTGTCACGCGCCACCACTCTATCCTCCCTCCCTCGCCTCAACAAACTGCCGCGTGTATCCCTCGTCAATGCTTCACTCCTCTCCGTCAAAGCGATCGGCTCTGTCGCTGATGGCGGGAACCTCGTTTGGGGAAGACAACTTCGTCCGGAGCTTTGCTCGCCGGTGTTGAAAAAAGATGCTGTACTCCTCCGCCCTTGCCTCGCTGCCGCCGAGGGAAATGATTCCGCCGGGGAAACGAAGGTAGCTCCAGTCGGGTTCTTCAGCAAGTACCCGGCTCTTGTTACCGGTTTTTTCTTCTTCACTTGGTACTTCTTGAATGTGATTTTCAACATCCTCAATAAGAAGATCTATAATTATTTCCCCTATCCTTACTTTGTGTCGGTTATCCATTTATTCGTGGGTGTGGTGTATTGTTTGGTGAGCTGGACTGTGGGCCTTCCTAAGCGCGCTCCTATAGATGCGAACCTGCTGAAGTTGCTCATACCTGTAGCTGTGTGTCATGCATTAGGCCATGTGACCAGCAATGTCTCATTTGCTGCAGTTGCTGTTTCTTTCACACATACCGTTAAAGCTCTTGAGCCATTCTTTAATGCTGCTGCTTCACAATTCATACTTGGACAATCAATTCCTATCACTCTTTGGCTCTCACTTGCTCCCGTTGTTATTGGTGTGTCATTGGCGTCGTTGACTGAGCTCTCATTCAATTGGCTCGGCTTCATAAGTGCTATGATTTCAAACATTTCATTTACATACAGGAGTATCTATTCAAAGAAAGCCATGACTGATATGGATAGTACCAATATCTATGCCTACATTTCCATCATTGCTCTAATTGTCTGCTTACCACCGGCCATAATTTTGGAAGGGCCTAAACTGTTGAAGCATGGTTTCAATGATGCAATTGCTCAAGTAGGTTTGGTCAAGTTTGTATCAGATCTCTTCTGGGTTGGTATGTTTTACCACCTCTACAACCAGGTGGCCACCAACACATTGGAGAGAGTGGCTCCTCTTACTCATGCAGTTGGCAATGTACTGAAACGTGTATTTGTCATTGGATTTTCAATTATAATCTTCGGTAACAAGATTTCCACCCAAACTGGTATTGGAACTGCCATTGCAATTGCTGGAGTGGCACTCTACTCCTTCATCAAAGCTAAGTTGGAGGAAGAGAAGCGACAAGCAAAAGCAGCATAA 1209 0.4599 MESRVLSRATTLSSLPRLNKLPRVSLVNASLLSVKAIGSVADGGNLVWGRQLRPELCSPVLKKDAVLLRPCLAAAEGNDSAGETKVAPVGFFSKYPALVTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWTVGLPKRAPIDANLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSLASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCLPPAIILEGPKLLKHGFNDAIAQVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTAIAIAGVALYSFIKAKLEEEKRQAKAA 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01619 402 PANTHER SOLUTE CARRIER FAMILY 35 30 394 - -
Car06g01619 402 Pfam Triose-phosphate Transporter family 99 386 IPR004853 -
Car06g01619 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 235 - -
Car06g01619 402 PANTHER BNAC02G47130D PROTEIN 30 394 - -
Car06g01619 402 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 98 396 IPR004696 GO:0016021|GO:0022857|GO:0055085
Car06g01619 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 318 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01619 Car-Chr6 15977404 15982181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01619 1 400 Antiporters AT5G46110 77.295 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01619 K15283 - gmx:100794336 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01619 06 15977404 15982181 Car06g01619 06 15977404 15982181 ECH