Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01618 ATGGAGGGCGAAGCCGGTTCAGAGGGAGACAGTGATCGGAAAAGGGGTGGCGCTGATGATAACAGCGACGAAAACAACAACAATAATAACGATGTAAGCAATAGCAAGATTGCGATTTCGAACGAAGGGCAGAGCAAACCCAAACGCCAGATGAAGACGCCGTTTCAACTGGAAACCCTTGAGAAAGCTTATGCCTTGGACAATTACCCTTCGGAGCCGGTGAGGGTAGAGTTGTCTGAGAAATTAGGATTGACGGATCGGCAGCTGCAGATGTGGTTCTGCCATAGGAGGTTGAAGGATAAGAAGGAGTCTGCCCCCAAAAAGCCGACACGGAAGCCAGTGCCCGAGCCTTTGCCGGATTCCCCGGTGGATGACCTTAGGTTGGGCTCTGAGCATGGTAATGAGTATGGATCAGATTCGGGTTCAGGTTCAAGTCCGTATACCCATATGGAGCCCCGGAATGCAATGCCCCAGAGTGTTGGTTATTATGAGTCGCCCGAGGTTGAAATGGAGCTTAGAGCAATCGCTTGTGTGGAGGATCAGTTAGGTGAACCATTGAGGGAAGATGGACCAATTCTAGGAATAGAGTTTGATACATTGCCACCAGATGCATTTGGGGCACCTATAGCAGTTACAGAACACCAGAAGCGGCCTGGTCTTTCCTATGACAGTAAAACATATGGAAGACATGATATCAGAACAAACAAGGCTATGGCGAGGACATCTGATGAATATAAATTTCTACCAAACCAGTCTGGCATTAGATCTGATTCTTTTGGACAGTTCAGCCAATCTCATTCACTTTCAATGGAGGGTCCTTCAAGAAGCCCTCAATTTGTGCTTGGACATGAACGGCTACCTAAAATTCATGCCAACCATGGCCATTCTTCTCGAGTTTCTCTTTTGTCTCAACAAGACAGGCAAGGGAGCCCCTATCAATCTCCTTCTCGAGATGACAATGTTTCCTCCCCACGGGAATTGTACCCAAACACCGTGAAAGTTGAAATGAACTCCTACCTCACTGATTGCCAAACTGTTGGGCCAGAAAATCCCAAGGCTTTAACTAGTGGACAATTTTTGCAAAACAATGCTATGCATATCGATAAGAAACGAAAGGGCGATGATGTCAAAAATACAAGGGATGTTGAAGCCCATGAGATGAGAATCCGGAAAGAGCTCGAGAGACAAGATATCCTTAGACGAAAGAATGAGGAGCGAATAAAGAAAGAAATGGAGAGACAAGATCGTGAAAGAAGGAAGGAAGAAGAGAGATTGATGCGTGAGAGACAGCGTGAAGAGGAAAGAACTAAACGAGAGGAAAAACGTGAAATTGAACGAAGGGAAAAATATTTGCTGAAAGAGAATTTAAAAGCTGAGAAATTGAGGCAAAGAGAAGAGCTTCGCAAGGAGAAAGAGGCAGAGAGAAGGAAAGCTGCCCTTGAAAAGGCAACTGCCCGTAGAATAGCTAAGGAATCTATGGAACTTATTGAGGATGAACAGCTGGAAATGATGGAGTTAGCTGCCTCAAGCAAGGGGCTTTCCTCTATTATTCGTCTTGATTTTGATACTTTGCAAAACATTGAATCATTTAGGGGTTCATTGTGTCTTTTCCCACCTGAGAGTGTAAAGCTAAGAAAACCATTTGCTATCCAACCATGGATCAACTCAGAAGAGAACGTTGGCAACCTTCTCATGGTTTGGAGGTTTTTGATTACCTTTGCTGATGTTCTGGAGTTATGGCCTTTTACTCTTGATGAGTTCGTGCAAGCATTTCATGACTATGATTCAAGATTGTTGGGTGAGATACATGTTGCTCTTCTTAAGGTGATAATAAAAGACATTGAAGATGTTGCGAGGACACCTTGTACAGGGTTAGGAATGAATCAGAATGGTGCTGCTAATTCTGGAGGCGGCCATCCTGAGATTGTGGAAGGGGCATATGCATGGGGCTTTGACATACGGAATTGGCATAAGCACTTAAATCAATTGACATGGCCAGAAATTTTCCGACAGCTAGCATTGTCTGCAGGATATGGACCACAATTTAAGAAAAGTAGTATTACATGTTCACGTGCAAATAGTAAAGATGAGGTTCAGTTTATTTTATTTTGCTTTAAAAATTTCAGCTGCTATAAAACAGCTGAAAATGCCGTAGCAAAAATGCAAGAGAGAGGTCTATTAGGACCTCGAAGATCTAGGCATCGGTTGACCCCTGGAACAGTTAAATTTGCAGCATTCCATGTTCTCTCACTAGAGAGTGGAGAGGGATTGAATGTACTAGAGCTTGCCGAAAAAATTCAGGTGAGTTCATATCCATATTCAATGATTTTTATTGTCAAGTCTGTTCTTAACTTGTTTCTTTCTACCTGTCAGAAATCTGGTCTTCGGGACCTGACAACCAGCAAGACACCTGAGGCATCAATTTCTGTTGCTTTGACAAGAGATGCCAAGCTTTTTGAAAGAGTAGCTCCATCAACATATTGTGTGCGTGCTGCATTTAGGAAGGATCCTGCTGATGCCGAGTCCATTCTTTCCGAAGCAAGAAAGAAAATTCAAATATTTGAAAATGGGTTTCTAGCCGAGGAAGATGCTGATGATGTTGAAAGAGAAGAGTCAGAAAGTGAAGTTGACGAGGATCCTGAAGTTGATGATTTGGTTAATCCTTCAAGTGTTGACAAAAAATCTGAACAGGGTAATGATTTCTCATCAAGTGGAAAAGAAAATCTGGGTCCTGGTGGAGAACGTAAAGATGAGTTCAATAAGGATCTGCCTTGTTTTCCTGAGAATGGTTCCAAGAATACTGATTGTCCCATTGCCGTCTCAGGAGAACCTGTTGCTTGTGAAAATCTAAGTGCCAGAAATCTTGGTGACGATAATATGGAAATTGATGAAAGTAAGTCTGGAGAGTCGTGGGTTCAAGGGCTTACTGAAGGAGAATATTCTGATCTCAGTGTAGAGGAGCGATTAAATGCACTTGCTGTATTGGTTGGTGTGGCAAATGAAGGAAATTTGATCCGTGTTGTTCTTGAGGATCGCTTGGAAGCAGCTAATGCTCTGAAGAAGCAAATGTTGGCAGAAGCACAAATAGATAAAGCTCGCCCGAAAGATGATAATGTCAATAAATCAGATTTTCCGTCTATCAATGGTGACAAGGTTGAAACACAGTTTACATATGCTGCTGTGGAGGGCAACCACAGTCCATTTCTTGGTATTTGCAATAATAATAATGGGGAATCTCCCAGCAAAACAGAGAATAAAAGTTCAGCTCTTGTTGGACAAAGCCTGTCTGAAAAGCTCTCATCAGTTCAAGATCTCTGCATAGGTCCTGATAATCATCAGACACTTTTATCTGCACAATATTCAAAACGGTCACGATCTCAGTTAAAATCATATATTTCCCATCTAGCAGAGGAGATGTACATCTATAGATCCTTACCCCTTGGGCAAGATCGCAGGCATAATCGATATTGGCAATTCGTTGCATCTGCATCTTGCAATGATCCTGGTTCCGGCAGGATATTTGTTGAATATCATGATGGCAAATGGAGGCTTATTGATTCCGAAGAGGCCTTTGATGCACTTCTGAATTCACTGGATTCACGTGGGATCAGGGAATCACATTTGCGTCTAATGTTGCTAAAGATTGAGAGTTCATTTAAGGAAAATGTTCAAAAGAATGCAAAATGTGCCAAAATTGGAAATACAGACAAAACTTGTGTCAAAAATGAAACCGATGAAACAGATTCCAGTCCTGATCGCCATACTAGATCTGACAGTCCTAGCAGTACTCTTTGTGGCTTGAGCTCTGATACTTCAGAAACTTCGTCATCCTTTAGAATTGAGCTTGGAAAAAGTGAGAGTGACAAGAAAGCTGCCTTGAGAAGGTATCAAGATTTTCAAAAATGGATGTGGAAAGAATGCTATAACTCATCAGTATTATGTGCAATGAAATATGGGAAAAAGAGATGCAAACCACAGGTTGACATATGTGATACCTGTCTCAATTTTTATTGCTTGGAAGACTCCCATTGCGGCTATTGCCACCGTACTTTTCCGTCAAATGATGGATTTAATTTTTCTAAACATGCAATTCAATGTGGAGACAAGTTACCCAAAAATATTTGTATTTTGGAATCTTCTCTTCCATTGCGGACAAGATTGTTGAAGGCCCTACTGGCTTTTATTGAGGTATCTGTTCCACCTGAAGCATTGCAATCAATTTGGTCAGAAGATATTAGGAGGCTTTGGGGTGTGAAGTTGAGCAGATCATCTTCTGTTGAGGAACTTCTACAGATATTGACTCTATTTGAGAGAGCACTAAAGCGAGATTTTATATTGTCACCCTTCTCTACAACTGCGGATTTGTTGGGGATGAACACTATGTCTGAGAGTGCTACACGTACTTCTATGGATCTTGAGTCAGTCACTGTTCTTCCATGGGTTCCACGGACCACTTCAGCTGTGTCTCTTAGACTTTTTGAGTTTGATACATCCATCATCTACGCACAGTTAGAGAAGCCTGAGCCCTGTGAGGGGAAAGAAGCTAGATACATAAAGCTTCCTTCTAGATATGCTTCTGCCAAACCAGCAGACTTAGACCGTGATGGATTTATGAAAGTGAACTCTGCCCCTACGAAAATTGTGCGAAGCAGCAGAAAACGGGGACGAGTAAGTCACGATAAAGGAAGGGTTAGAAAGCTGTCTAAAAGAACAGATGATTGCAAACGAGACAATGGCCGCCATAATTTTAAGGTCACCGAGAATCTGGGTCAAAGATTAGAACAGCAGGGACAGGGATCACAAGGACAAGCAGGTGGAAGTGGCCGCCGAACAGTCAGGAAAAGGAGAGCGGAGAAGAGGGTTGTTGAAGATTTGTTGCTGGGACATAGAGCTGCCAATCATAGCTACAATATTGATAGAGAACCATTGAGAATCTTGGATGAGGACTGGAATGATGAGAAGGCTAGTCCCATCCAGATGGAAGGTGCTGACATGAGTGACAGTAGTGAAGAGGTTGAATATGATGACAACGCCCAAGCAGTGGAATCTGATGACAATGTCGAAGCAGTTGAATATGACGACCACAATGCCCAGGCAGTGGAATCTGATGACAACGTCGAAGCAGTTGAGTACGGTCAAGGAAACTGGGAGATAGGTTTTAATGGTACCCCCAACAGATGGAATAGGGATTTGGTAGGAATGGGTGATGAAGAAGATGCCGAAGTTTCTGAAGATGACAATGGCATTGAAGAGAATGAAGTGGAAGAGGAGGAGGATTCTGAGGCAGATGTTATGAGCGAGGGTTCAGATGGTATGGCAAATAGAGTTGTAAATGAAGAAATCTCAGACTCTAGTGACTCTGAAGATTCTTCTGATTAG 5379 0.4261 MEGEAGSEGDSDRKRGGADDNSDENNNNNNDVSNSKIAISNEGQSKPKRQMKTPFQLETLEKAYALDNYPSEPVRVELSEKLGLTDRQLQMWFCHRRLKDKKESAPKKPTRKPVPEPLPDSPVDDLRLGSEHGNEYGSDSGSGSSPYTHMEPRNAMPQSVGYYESPEVEMELRAIACVEDQLGEPLREDGPILGIEFDTLPPDAFGAPIAVTEHQKRPGLSYDSKTYGRHDIRTNKAMARTSDEYKFLPNQSGIRSDSFGQFSQSHSLSMEGPSRSPQFVLGHERLPKIHANHGHSSRVSLLSQQDRQGSPYQSPSRDDNVSSPRELYPNTVKVEMNSYLTDCQTVGPENPKALTSGQFLQNNAMHIDKKRKGDDVKNTRDVEAHEMRIRKELERQDILRRKNEERIKKEMERQDRERRKEEERLMRERQREEERTKREEKREIERREKYLLKENLKAEKLRQREELRKEKEAERRKAALEKATARRIAKESMELIEDEQLEMMELAASSKGLSSIIRLDFDTLQNIESFRGSLCLFPPESVKLRKPFAIQPWINSEENVGNLLMVWRFLITFADVLELWPFTLDEFVQAFHDYDSRLLGEIHVALLKVIIKDIEDVARTPCTGLGMNQNGAANSGGGHPEIVEGAYAWGFDIRNWHKHLNQLTWPEIFRQLALSAGYGPQFKKSSITCSRANSKDEVQFILFCFKNFSCYKTAENAVAKMQERGLLGPRRSRHRLTPGTVKFAAFHVLSLESGEGLNVLELAEKIQVSSYPYSMIFIVKSVLNLFLSTCQKSGLRDLTTSKTPEASISVALTRDAKLFERVAPSTYCVRAAFRKDPADAESILSEARKKIQIFENGFLAEEDADDVEREESESEVDEDPEVDDLVNPSSVDKKSEQGNDFSSSGKENLGPGGERKDEFNKDLPCFPENGSKNTDCPIAVSGEPVACENLSARNLGDDNMEIDESKSGESWVQGLTEGEYSDLSVEERLNALAVLVGVANEGNLIRVVLEDRLEAANALKKQMLAEAQIDKARPKDDNVNKSDFPSINGDKVETQFTYAAVEGNHSPFLGICNNNNGESPSKTENKSSALVGQSLSEKLSSVQDLCIGPDNHQTLLSAQYSKRSRSQLKSYISHLAEEMYIYRSLPLGQDRRHNRYWQFVASASCNDPGSGRIFVEYHDGKWRLIDSEEAFDALLNSLDSRGIRESHLRLMLLKIESSFKENVQKNAKCAKIGNTDKTCVKNETDETDSSPDRHTRSDSPSSTLCGLSSDTSETSSSFRIELGKSESDKKAALRRYQDFQKWMWKECYNSSVLCAMKYGKKRCKPQVDICDTCLNFYCLEDSHCGYCHRTFPSNDGFNFSKHAIQCGDKLPKNICILESSLPLRTRLLKALLAFIEVSVPPEALQSIWSEDIRRLWGVKLSRSSSVEELLQILTLFERALKRDFILSPFSTTADLLGMNTMSESATRTSMDLESVTVLPWVPRTTSAVSLRLFEFDTSIIYAQLEKPEPCEGKEARYIKLPSRYASAKPADLDRDGFMKVNSAPTKIVRSSRKRGRVSHDKGRVRKLSKRTDDCKRDNGRHNFKVTENLGQRLEQQGQGSQGQAGGSGRRTVRKRRAEKRVVEDLLLGHRAANHSYNIDREPLRILDEDWNDEKASPIQMEGADMSDSSEEVEYDDNAQAVESDDNVEAVEYDDHNAQAVESDDNVEAVEYGQGNWEIGFNGTPNRWNRDLVGMGDEEDAEVSEDDNGIEENEVEEEEDSEADVMSEGSDGMANRVVNEEISDSSDSEDSSD 1792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01618 1792 Coils Coil 1006 1026 - -
Car06g01618 1792 Gene3D - 29 107 - -
Car06g01618 1792 Pfam DDT domain 558 613 IPR018501 -
Car06g01618 1792 MobiDBLite consensus disorder prediction 1240 1255 - -
Car06g01618 1792 MobiDBLite consensus disorder prediction 97 153 - -
Car06g01618 1792 Pfam HB1, ASXL, restriction endonuclease HTH domain 790 831 IPR007759 GO:0006355
Car06g01618 1792 MobiDBLite consensus disorder prediction 97 114 - -
Car06g01618 1792 MobiDBLite consensus disorder prediction 1549 1564 - -
Car06g01618 1792 MobiDBLite consensus disorder prediction 294 325 - -
Car06g01618 1792 CDD homeodomain 48 104 IPR001356 GO:0003677
Car06g01618 1792 SMART testlast3 557 616 IPR018501 -
Car06g01618 1792 MobiDBLite consensus disorder prediction 1 56 - -
Car06g01618 1792 MobiDBLite consensus disorder prediction 1565 1583 - -
Car06g01618 1792 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1143 1215 IPR028941 -
Car06g01618 1792 ProSiteProfiles 'Homeobox' domain profile. 43 103 IPR001356 GO:0003677
Car06g01618 1792 MobiDBLite consensus disorder prediction 296 325 - -
Car06g01618 1792 MobiDBLite consensus disorder prediction 1 21 - -
Car06g01618 1792 MobiDBLite consensus disorder prediction 245 274 - -
Car06g01618 1792 PANTHER HOMEOBOX DOMAIN PROTEIN 788 1792 - -
Car06g01618 1792 MobiDBLite consensus disorder prediction 1584 1607 - -
Car06g01618 1792 MobiDBLite consensus disorder prediction 891 906 - -
Car06g01618 1792 Coils Coil 453 484 - -
Car06g01618 1792 MobiDBLite consensus disorder prediction 1723 1792 - -
Car06g01618 1792 MobiDBLite consensus disorder prediction 1256 1278 - -
Car06g01618 1792 MobiDBLite consensus disorder prediction 1737 1765 - -
Car06g01618 1792 SUPERFAMILY Homeodomain-like 33 103 IPR009057 -
Car06g01618 1792 Coils Coil 404 447 - -
Car06g01618 1792 MobiDBLite consensus disorder prediction 22 52 - -
Car06g01618 1792 ProSiteProfiles DDT domain profile. 557 616 IPR018501 -
Car06g01618 1792 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 788 1792 IPR044977 GO:0006357
Car06g01618 1792 MobiDBLite consensus disorder prediction 862 885 - -
Car06g01618 1792 MobiDBLite consensus disorder prediction 410 442 - -
Car06g01618 1792 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 16 770 IPR044977 GO:0006357
Car06g01618 1792 MobiDBLite consensus disorder prediction 1240 1278 - -
Car06g01618 1792 SMART HOX_1 45 107 IPR001356 GO:0003677
Car06g01618 1792 MobiDBLite consensus disorder prediction 1546 1616 - -
Car06g01618 1792 MobiDBLite consensus disorder prediction 135 152 - -
Car06g01618 1792 Pfam Homeodomain 46 102 IPR001356 GO:0003677
Car06g01618 1792 MobiDBLite consensus disorder prediction 862 928 - -
Car06g01618 1792 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 967 1010 IPR028942 -
Car06g01618 1792 MobiDBLite consensus disorder prediction 243 278 - -
Car06g01618 1792 PANTHER HOMEOBOX DOMAIN PROTEIN 16 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01618 Car-Chr6 15961662 15971891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01618 4 1706 Homeobox Transcription Factor Family AT1G28420 46.249 0.0 1261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Car06g01618 WSD 8.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01618 - - gmx:100818817 2320.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01618 06 15961662 15971891 Car06g01618 06 15961662 15971891 ECH
Car06g01618 06 15961662 15971891 Car01g00351 01 2736174 2744705 PCT