Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01581 ATGGATGAAACTAGTAGTTCTTGGATAAGGAGGACGAAATTCTCTCACACCGTGTGTCACCGATTGGATTATTCAAGAATTGGCTCTTTCATTATTCGGCCAGAGGCAGTGCAGAATCCGGATCTGAGAGTAAGGTcagcagcatcatcagctgcgtcatcaacagcagcatcagcaCCTCCTGTTGTTTCTAAGGTTTCAAAGGTTTCAAAGGTTCGGAAGAATCCTATAACTAATAAACAGAGATCTTTATCTCCTTTGCCTGAATCCTCTCTTTCTGAAACCTTTAAGGAAGCCAAGCATGAACAGAAGAGGTTCTCGACGCCAGGTCCAAGGAGAAAAGAGCAGGATACAAGAATCATGGGGAAGCTACTGAACAAGGATTCTCAAGTGTCCAATTCTAAATCGCCTCATAGAAGTCCAAGCAATTACTTTGCATCAATGAAATTCAGTGACAAGTCAAAGAACCGCAAGGACTCGGGATGGACAAAGTATTTCGACCACGGTGGAGGAAAGGTTACCGCTGTGGAAACGGCTGAAGAATGGAATGTTGACCTCTCTAAGCTCTTTGTTGGTCTTAGGTTTGCTTACGGGGCTCATAGTAGGCTTTACCATGGTATGTATGAGGACGAACCTGTTGCAGTGAAAATTATCAGGGTCCCAGATGATGACGAAAATGGCACGTTGGCTGCTAGATTAGAGAAACAATTCATTGCAGAAGTCACACTTTTATCTCGCCTCCACCATCAAAATGTTCTTAAGTTTGTAGCAGCATGCAGAAAGCCACCTGTTTATTGTGTTATCACAGAATATCTATCGGAAGGTTCCTTGAGGGCTTATTTGCATAAGTTGGAGGGAAAAACAATTCCTCTACAAAAGCTAATTGCTTTTTCTCTGGATATTGCTCATGGAATGGAATATATACACTCTCAAGGTGTCATTCATCGAGACCTTAAACCCGAGAACATTCTTATCAATGGAGACTTTCACCTCAAAATTGCTGATTTTGGCATTGCTTGTGAGGAAGCATACCACGACTTACTCGCTGATGACCCTGGTACCTACCGCTGGATGGCACCTGAGATGATCAAACGAAAGTCCTATGGGAGAAAGGTTGATGTATATAGTTTTGGGCTTATCTTATGGGAGATGCTTAATGGTACAATACCATATGAAGATATGACTCCCATCCAGGCTGCTTATGCTGTAGTAAATAAGAAATCCAGGCCTGTTATTCCTTCAAACTGCCCACCTGCAATGAGAGCTTTAATTGAGCAATGTTGGTCCTTGAATCCGGAAAAAAGGCCCGAGTTCTGGCAGGTTGTTAAGGTGTTACAGCAATTTGAATCTTCGCTTGCTCATGAAGGAACAATTTCCCTGCTGCAAAACCCTTTTTGCCAAGATCATAAAAAGGGGCTTCACCATTGGATTCAAAAGCTCAGTCCTTCACATCAAAGCAGTGGTCCTGTGCCTAAACCAAAATTTTCATGA 1491 0.4131 MDETSSSWIRRTKFSHTVCHRLDYSRIGSFIIRPEAVQNPDLRVRSAASSAASSTAASAPPVVSKVSKVSKVRKNPITNKQRSLSPLPESSLSETFKEAKHEQKRFSTPGPRRKEQDTRIMGKLLNKDSQVSNSKSPHRSPSNYFASMKFSDKSKNRKDSGWTKYFDHGGGKVTAVETAEEWNVDLSKLFVGLRFAYGAHSRLYHGMYEDEPVAVKIIRVPDDDENGTLAARLEKQFIAEVTLLSRLHHQNVLKFVAACRKPPVYCVITEYLSEGSLRAYLHKLEGKTIPLQKLIAFSLDIAHGMEYIHSQGVIHRDLKPENILINGDFHLKIADFGIACEEAYHDLLADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMLNGTIPYEDMTPIQAAYAVVNKKSRPVIPSNCPPAMRALIEQCWSLNPEKRPEFWQVVKVLQQFESSLAHEGTISLLQNPFCQDHKKGLHHWIQKLSPSHQSSGPVPKPKFS 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01581 496 MobiDBLite consensus disorder prediction 71 92 - -
Car06g01581 496 PRINTS Tyrosine kinase catalytic domain signature 269 282 IPR001245 GO:0004672|GO:0006468
Car06g01581 496 PRINTS Tyrosine kinase catalytic domain signature 307 325 IPR001245 GO:0004672|GO:0006468
Car06g01581 496 PRINTS Tyrosine kinase catalytic domain signature 353 363 IPR001245 GO:0004672|GO:0006468
Car06g01581 496 PRINTS Tyrosine kinase catalytic domain signature 372 394 IPR001245 GO:0004672|GO:0006468
Car06g01581 496 PRINTS Tyrosine kinase catalytic domain signature 416 438 IPR001245 GO:0004672|GO:0006468
Car06g01581 496 MobiDBLite consensus disorder prediction 51 158 - -
Car06g01581 496 Gene3D Transferase(Phosphotransferase) domain 1 274 480 - -
Car06g01581 496 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 472 - -
Car06g01581 496 CDD STKc_MAP3K-like 198 445 - -
Car06g01581 496 ProSiteProfiles Protein kinase domain profile. 189 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01581 496 Pfam Protein tyrosine and serine/threonine kinase 198 445 IPR001245 GO:0004672|GO:0006468
Car06g01581 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Car06g01581 496 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 472 - -
Car06g01581 496 MobiDBLite consensus disorder prediction 123 150 - -
Car06g01581 496 SUPERFAMILY Protein kinase-like (PK-like) 176 445 IPR011009 -
Car06g01581 496 SMART serkin_6 189 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01581 496 MobiDBLite consensus disorder prediction 94 122 - -
Car06g01581 496 Gene3D Phosphorylase Kinase; domain 1 177 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01581 Car-Chr6 15583798 15586822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01581 1 496 MAP Kinase Kinase Kinase AT5G58950 54.906 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Car06g01581 PK_Tyr_Ser-Thr 1.9e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01581 - - gmx:100784454 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01581 06 15583798 15586822 Car01g00323 01 2449717 2463253 PCT