Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01556 ATGTCCTCCTTTCTACAAACTTCTCTTTCACACCAAAATTTCCATTCATTCACAATGCTTTTCTTCACCATCTTTCCACTCTTACTCTCACTTCTATTCATCATAAAAAAATGGTATTTCAACACCAAGAAAAACTCACCACCTTCACCTCCAAGATTTCCTCTACTTGGGAATCTCCATCAACTTGGCTTGTTCCCTCACCGAACACTCCAAACTTTATCTCACAAATATGGCCCTTTAATGCTTCTTTATTTTGGAAAGGTTCCAGTACTTGTTGTTTCATCTTCTGATGCAGCAAGTAAAGTAATGAAAACTCATGACTTAGTTTTCTCTGATAGACCACAACGTAAAATCTTTGATATCATGTTATATGGTTCCAAAGATGTTGCAAGTTGTGCATATGGTGAGTATTGGAGACAAGTAAGGAGTCTAAGTGTGTTACATCTTCTTAGTAACAAAAGGGTTCAATCTTATCGTCGTGTAAGAGAAGAAGAAACTTCAAGAATGATGGAACATATTAACAAGAGTACTTCTTGTGTGAATTTATCTGAGTTGTGTTCTAGAATTACTAATGATATAACATGTAGGGTGACTTTAGGAAAGAGATATGGTGAAGAAGGTGGTGTGTTTCCTGAGCTGATGTTGGAGTTTGGAGAGTTGTTGGGTAGTTTCTTTATAGGTGATTATATACCTTGGCTTAACTGGTTGGGAAAGGTTAATGGTTTTTATAGCAGAGCTGAAAAAGTGGCTAAACATTTGGATGATTTTTTTGAGGAAGTGATTGAGGATCATATTAGTGGTAGTAGATTTGATAGGGATGTTAGTGTTGACAGTGAGGAAAGTGATGATTTTGTGGATATTTTGCTTTCTGTTCAAAAGTCCAATGCTATTGGCTTCTCAATTGATAGAACTGCAATTAAGGGTTTGTTACTGGACATGTTTGCTGCAGGTACTGATACAACCTACACAGTCCTAGAATGGGCAATGACAGAACTATTAAGACACCAAACTGTGATGCAAAAATTGCAAGATGAGGTTAGAAATGTGGTTGGTAACAAAACTCAAGTAACTGAAGAAGATTTGGTTAACATGAACTACTTGAAGGCTGTGATTAAAGAAACTCTTCGCCTCCATGTACCGATTCCGTTATTAGTCCCTCGGAAATCCATGGAAGATATCAAAGTAAATGGCTATGACATTGCAGCTGGAACACAGGTAATAGTGAATGCTTGGGCTATTGCAAGAGACCCTTCAATTTGGGATGAACCTCTAGAGTTTAAACCAGAAAGGTTTATGAATAGTTCAATTGATTTTAAAGGATTTGATTTTGAACTTATTCCATTTGGAGCAGGAAGGAGAGGTTGTCCTGGACTCTTGTTTGCTATTGCTGTCAATGAATTGGTGTTAGCTAATCTTGTTTATCATTTTCATTGGAAATTGCCTAATGGTGTTGCAGGGGAAGACTTGGACATGTCTGAAGTTGTTAGCTTTACTTGTCATAGAAAATACCCTCTCATTGCTATACCTACCAAATATGAGAAAAATGAAGAAAACCAAAGGGGAAAAAGTATCATGTAG 1578 0.3688 MSSFLQTSLSHQNFHSFTMLFFTIFPLLLSLLFIIKKWYFNTKKNSPPSPPRFPLLGNLHQLGLFPHRTLQTLSHKYGPLMLLYFGKVPVLVVSSSDAASKVMKTHDLVFSDRPQRKIFDIMLYGSKDVASCAYGEYWRQVRSLSVLHLLSNKRVQSYRRVREEETSRMMEHINKSTSCVNLSELCSRITNDITCRVTLGKRYGEEGGVFPELMLEFGELLGSFFIGDYIPWLNWLGKVNGFYSRAEKVAKHLDDFFEEVIEDHISGSRFDRDVSVDSEESDDFVDILLSVQKSNAIGFSIDRTAIKGLLLDMFAAGTDTTYTVLEWAMTELLRHQTVMQKLQDEVRNVVGNKTQVTEEDLVNMNYLKAVIKETLRLHVPIPLLVPRKSMEDIKVNGYDIAAGTQVIVNAWAIARDPSIWDEPLEFKPERFMNSSIDFKGFDFELIPFGAGRRGCPGLLFAIAVNELVLANLVYHFHWKLPNGVAGEDLDMSEVVSFTCHRKYPLIAIPTKYEKNEENQRGKSIM 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01556 525 Pfam Cytochrome P450 47 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g01556 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Car06g01556 525 Gene3D Cytochrome P450 36 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g01556 525 Coils Coil 339 359 - -
Car06g01556 525 PANTHER CYTOCHROME P450 71B11-RELATED 22 513 - -
Car06g01556 525 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g01556 525 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g01556 525 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g01556 525 PANTHER CYTOCHROME P450 FAMILY PROTEIN 22 513 - -
Car06g01556 525 SUPERFAMILY Cytochrome P450 47 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g01556 525 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g01556 525 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g01556 525 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g01556 525 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g01556 525 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g01556 525 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g01556 525 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g01556 525 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g01556 525 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01556 Car-Chr6 15313704 15316097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01556 36 510 Cytochrome P450 AT3G48270 51.153 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01556 - - gmx:100819183 705.671