Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01546 ATGGCTTATAGACGTTGCCTCTTGCAAAGAGGGAACCTTATAGATCGGAGGTGCCATCCATCTTTCAGTTATGTTTTCCATAGTGATGAAGGGAAACGTGAGCAGCCAGATGAGAAACCATCTTCAACAGGGATTAACAATTTTATCCAAAGAAGGTCCTTTGGAAGCTCTCTTAATGGATCAATGGGGTTTTTTTCATCTTCTCATAATAGAATTCTTTCTCCATACGCCGGATATAATTTCTGTCGAAATATGTCGACATCGGATCAGGGTTCAGATAAGATTGGTATAATGACTGATGTAGCTGATGTTCTCAGTGACACGACTCTGGAGGCTGTATCTTCTCAGGCTCCTGTTGTTAGTGAAGTTGCCATTGCTGCTGCTGATTCTTATTTGCCTGTTCAGGCCTTGCAGTATGCGATAGATGCTGTGCATTCCTTCACTGGCCTAAACTGGTGGGCGTCCATAGTTCTAACAACTCTCTTGATTCGAAGTGCAACTATTCCACTCTTAGTAAATCAACTCAAGGCCACTTCTAAGCTTACACTAATGAGGCCTCGCTTGGAAGAGATAAAGGAGCAATTGGATGGGAAGACAATGGATCCCGAGGCTGTTGAGGAAGGTCAGAAGAAGATGAAAAAGCTATTCAAAGAATATGGTGTGACTCCATTTACGCCGTTGAAGGGACTCTTTATTCAAGGTCCTGTCTTCATTAGTTTTTTTCTTGCGATAACAAACATGGCTGAAAAAATGCCATCATTCAAGCATGGTGGAGCTTTCTGGTTTACCGATCTCACAACTCCAGATGCCTTATACATATTTCCAGTTATAACTGCATTGTCATTTTTAATAGTAGTAGAGTGTAATATGCAAGAAGGAATGGAAGGAAATCCTGTGGCTGGCACCATGAAAAATTTCTCAAGAGTTCTTGCTCTTCTTTCAGTTCCTTTCACCATGAGCTTTCCTAAGGCTATATTTTGTTACTGGATTACATCGAATTTGTTTTCACTGTCGTATGGAATGGTGCTTAAAGTTCCTGGTGTAAAGAAAACTTTGGGTATTCCTGATTTACCTGCTGCACCACCCACCAGTTTTCCACAATCTCCCTTCTCTATATTTCCAGCACTAAAACAAGCTGCATCAGTGACAAATGGGCAAAGCTCAATGCCAGTGGAATCACCAAAACTATCAAATAAAAAGATATCTTCTTCTTCCTCTGTTATTAGTCAAAGGCTTAGAAGCTTAGAGAAACAAGTAAAAGGAAGAAAGAAAAGCAAGAAGTGA 1284 0.4065 MAYRRCLLQRGNLIDRRCHPSFSYVFHSDEGKREQPDEKPSSTGINNFIQRRSFGSSLNGSMGFFSSSHNRILSPYAGYNFCRNMSTSDQGSDKIGIMTDVADVLSDTTLEAVSSQAPVVSEVAIAAADSYLPVQALQYAIDAVHSFTGLNWWASIVLTTLLIRSATIPLLVNQLKATSKLTLMRPRLEEIKEQLDGKTMDPEAVEEGQKKMKKLFKEYGVTPFTPLKGLFIQGPVFISFFLAITNMAEKMPSFKHGGAFWFTDLTTPDALYIFPVITALSFLIVVECNMQEGMEGNPVAGTMKNFSRVLALLSVPFTMSFPKAIFCYWITSNLFSLSYGMVLKVPGVKKTLGIPDLPAAPPTSFPQSPFSIFPALKQAASVTNGQSSMPVESPKLSNKKISSSSSVISQRLRSLEKQVKGRKKSKK 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01546 427 Pfam 60Kd inner membrane protein 152 338 IPR001708 GO:0016021|GO:0032977
Car06g01546 427 PANTHER OXA1 1 386 IPR001708 GO:0016021|GO:0032977
Car06g01546 427 MobiDBLite consensus disorder prediction 384 413 - -
Car06g01546 427 MobiDBLite consensus disorder prediction 384 427 - -
Car06g01546 427 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1-RELATED 1 386 - -
Car06g01546 427 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 151 338 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01546 Car-Chr6 15166469 15173425 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01546 132 350 Chloroplast and Mitochondria Gene Families AT2G28800 23.661 4.27e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01546 K03217 - gmx:100817052 660.988