Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01538 ATGCTTGAATCTCTTAAGGCTGACAAGAATGAGAAAAGAGACGATTGTCGtgttgacaatgactcagttgggctggaattacaagttcctttgcagAAATCAGAAAGAGTCGAATCTTCCACTAAAGAGATGTCAAAGGATGGGCTATCGGCTGGGAGTTTTACACATCAAAGCCAGACAAACTGGTCTCATGAATGCCACATTCCAGCAATGTCTTCTGAAGACATGGAGATTAAGCCGGAAGGTTCAGGGTCTATTGAACATGAGAAAGTTTTGAATGTAGATAAGCTGACACATACTTTATATGAAACACAGGGAGGGAGTTTTAAAAAACGGAGAGGGaagagaaagaggaaggattgtggaagaaagatcaacgaagcaagtgtaagagaaagtgaCTTCTCATTTGATGCGTCTTGGTTTAAAGAAAGTTCTACCAGCAACTGTGGTGAGGTTGTCAAATCTTCTGGTATAACTGAGGAGAACACAAAGTTGAAAAAGGATGAAATGAAAGATATGATGGAGATTTTAGATTCTGTTTTGGAAATTAAAGGCGCATTTGCCTTCTGTCGCAAGCATGATAGTCAGAAGCGGGCAAGGTACAGGATGTTAATCCGGAGGCACATGGATTTTGACGCTATAAGGTCAAGAATTAGCAACCAAACAATTAATTCAGTGATGGAACTTTTCAGAGACATGCTTCTACTGGCCAACAATGCTTTGGTCTTCTACTCCAAGAACACTCGGCAATATAAATATGCGCTACTCCTGAGAGACATCGTCACACAAAAGCTGAGGGAAAATGTCAAGTTTTTCAGTAGGAGTGTCATGCATGCTAATGTCTCTAACTCTATCATATTACCTGTTCACGATTCTTCTTTGAATGTCAGAAGTGTACGCTCTGGTAACCGAAAGATCATTGTTGCAGAGGCAGCTGATGGCAGCAATCCTGCTATTGCAATCTCAAATGGAGCCAAGAAGCCTAGTAGTAAAGAGGATTCCCCATGTTCAGTGAAAACCTTACACATCAAGAAAGCTTTTGGTGGACCTAAAAAACTTGAACCCGCAACACCAATGAAGGAAATGAAGGAAAAGACAAGAAGGAGAACCAAGTAA 1119 0.3709 MLESLKADKNEKRDDCRVDNDSVGLELQVPLQKSERVESSTKEMSKDGLSAGSFTHQSQTNWSHECHIPAMSSEDMEIKPEGSGSIEHEKVLNVDKLTHTLYETQGGSFKKRRGKRKRKDCGRKINEASVRESDFSFDASWFKESSTSNCGEVVKSSGITEENTKLKKDEMKDMMEILDSVLEIKGAFAFCRKHDSQKRARYRMLIRRHMDFDAIRSRISNQTINSVMELFRDMLLLANNALVFYSKNTRQYKYALLLRDIVTQKLRENVKFFSRSVMHANVSNSIILPVHDSSLNVRSVRSGNRKIIVAEAADGSNPAIAISNGAKKPSSKEDSPCSVKTLHIKKAFGGPKKLEPATPMKEMKEKTRRRTK 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01538 372 MobiDBLite consensus disorder prediction 44 60 - -
Car06g01538 372 PANTHER BROMODOMAIN PROTEIN 2 371 - -
Car06g01538 372 SUPERFAMILY Bromodomain 159 271 IPR036427 GO:0005515
Car06g01538 372 MobiDBLite consensus disorder prediction 1 21 - -
Car06g01538 372 MobiDBLite consensus disorder prediction 347 372 - -
Car06g01538 372 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 2 371 - -
Car06g01538 372 CDD Bromodomain 170 266 - -
Car06g01538 372 SMART bromo_6 167 271 IPR001487 GO:0005515
Car06g01538 372 MobiDBLite consensus disorder prediction 1 60 - -
Car06g01538 372 Gene3D - 160 278 IPR036427 GO:0005515
Car06g01538 372 ProSiteProfiles Bromodomain profile. 182 252 IPR001487 GO:0005515
Car06g01538 372 Pfam Bromodomain 175 255 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01538 Car-Chr6 15068232 15072727 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01538 - - mtr:MTR_4g090460 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01538 06 15068232 15072727 Car01g00278 01 2092361 2098882 PCT