Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01503 ATGCGGGGTTCCAATTTCTTCCAACGTTTTTCTAAAGTTTACCGTGACTACGACTCGCACTTCAAGCTTGTTCTGCTCTGCACCACCGTCAGTGGCGGTGGGCTTTTGGCTTACGGTGAGGCGGTTGCTACATCTGAAGCGGCGGTGACGGAGAAGAAAAAAAAAGTGTTGGTGCTGGGAACTGGTTGGGCAGGAACTAGTTTCTTGAGGAATCTCAACAATCCTAGTTATGAGGTTCACGTGGTGTCTCCTCGCAATTATTTTACATTCACTCCTCTGCTTCCTAGTGTTACCTGCGGCACCGTTGAGGCTCGCAGCATTGTTGAACCCGTCCGCAATATCTTCAGGAAGAAACATGTGGACTCTCGATTCAGTGAAGCAGAATGTATCAAGATTGATGCCGTAAACAGAAAAGTTTACTGTCGATCTAATATAAACAATAATTTGAATGCAAAAGAAGAATTTGTTGTGGACTATGACTACTTAATCATAGCTGTGGGAGCAAATGTCAACACTTTTAATACTCCCGGAGTCACGGAGAATTGCCATTTCTTGAAGGAAGTTGAAGATGCACAAAAGATTAGAAGAACTGTAATTGACTGCTTTGAGAGAGCAAGTTTGCCTAGTGTAAGTGAAGAAGAAAGAAAGAGAATTCTTCATTTTGCTATTGTTGGAGGTGGTCCAACTGGAGTGGAGTTTGCAGCCGCACTTCATGATTTTGTTAGGGAGGATTTGGTCAAGTTATATCCTGGAGTAAAAGATTTTGTTAAAATTACGCTTCTGGAGGCTGGAGGTCATATCTTGAGCATGTTTGACAAAAGAATAACAGCTTTTGCTGAAGACAAGTTCCAAAGAGAGGGTATTGATGTGAAAACAGGATCCATGGTTGTGAAGGTATCTGACAGAGAAATTTCCACTAAAGAAATGAAAAATGGAGGAGAAATTACTACCATTCCATATGGAATGGCTGTCTGGTCTACTGGCATTGGCACTCGTCCGTTCATAAAAGATTTTATGACACAAATTGGTCAGATTAACAGACGTGCCATAGCTACTGATGAATGGTTGAGAGTTGAGGGAACCAACAATGTGTATGCGCTTGGTGATTGTGGTACAATAAACCAGCGAAAAGTCATGGAAGATATTGCAGCAATATTTAAGAAGGCTGATGCAGATAATTCAGGAACACTTACTGTCAAAGAATGTCAGGAGGTAATTAATGACATCTGTGAAAGATACCCTCAGGTGGAGCTATATCTAAAGAGTAAACAGATGCACAGCATTGCTGATCTTTTGAAGGAATCCAAGGTAGATGATAAAAAAGAATCTATTGAACTGAACATTGAAGAACTCAAAACTGCACTTGCCAATGTGGACTCCCAGATGAAATTTCTTCCTGCTACGGCTCAGGTTGCATCTCAGCAAGGCACCTACCTGGCCAAGTGTTTTAACCGGATGGAAGAGTGTGAAAAAAACCCAGAGGGTCCTATTAGGTTCAGGGAAGAAGGGCGTCATCGGTTCAAACCCTTCAGGTACAAGCATTTAGGTCAATTCGCTCCTCTAGGAGGAGAGGAGACAGCTGCACAACTACCTGGAGATTGGGTTTCAATTGGACACAGCAGTCAATGGCTGTGGTATTCTGTCTATGCAAGCAAACAAGTCAGCTGGCGCACAAGGGCGTTAGTAGTATCAGACTGGATGAAACGCTTTATTTTTGGGAGGGACTCGAGTCAAATCTGA 1740 0.427 MRGSNFFQRFSKVYRDYDSHFKLVLLCTTVSGGGLLAYGEAVATSEAAVTEKKKKVLVLGTGWAGTSFLRNLNNPSYEVHVVSPRNYFTFTPLLPSVTCGTVEARSIVEPVRNIFRKKHVDSRFSEAECIKIDAVNRKVYCRSNINNNLNAKEEFVVDYDYLIIAVGANVNTFNTPGVTENCHFLKEVEDAQKIRRTVIDCFERASLPSVSEEERKRILHFAIVGGGPTGVEFAAALHDFVREDLVKLYPGVKDFVKITLLEAGGHILSMFDKRITAFAEDKFQREGIDVKTGSMVVKVSDREISTKEMKNGGEITTIPYGMAVWSTGIGTRPFIKDFMTQIGQINRRAIATDEWLRVEGTNNVYALGDCGTINQRKVMEDIAAIFKKADADNSGTLTVKECQEVINDICERYPQVELYLKSKQMHSIADLLKESKVDDKKESIELNIEELKTALANVDSQMKFLPATAQVASQQGTYLAKCFNRMEECEKNPEGPIRFREEGRHRFKPFRYKHLGQFAPLGGEETAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVSDWMKRFIFGRDSSQI 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01503 579 Coils Coil 441 461 - -
Car06g01503 579 Gene3D - 423 578 - -
Car06g01503 579 Gene3D - 45 422 - -
Car06g01503 579 SUPERFAMILY FAD/NAD(P)-binding domain 214 373 IPR036188 -
Car06g01503 579 Pfam Pyridine nucleotide-disulphide oxidoreductase 54 378 IPR023753 GO:0016491
Car06g01503 579 ProSiteProfiles EF-hand calcium-binding domain profile. 377 412 IPR002048 GO:0005509
Car06g01503 579 SUPERFAMILY EF-hand 371 466 IPR011992 -
Car06g01503 579 PANTHER NAD(P)H DEHYDROGENASE B2 4 579 - -
Car06g01503 579 SUPERFAMILY FAD/NAD(P)-binding domain 53 272 IPR036188 -
Car06g01503 579 PANTHER NADH DEHYDROGENASE 4 579 IPR045024 GO:0003954|GO:0006116
Car06g01503 579 PRINTS FAD-dependent pyridine nucleotide reductase signature 28 47 - -
Car06g01503 579 PRINTS FAD-dependent pyridine nucleotide reductase signature 159 177 - -
Car06g01503 579 PRINTS FAD-dependent pyridine nucleotide reductase signature 220 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01503 Car-Chr6 14650685 14656759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01503 1 579 Chloroplast and Mitochondria Gene Families AT4G21490 72.384 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01503 K03885 - gmx:100809915 1020.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01503 06 14650685 14656759 Car06g01503 06 14650685 14656759 ECH
Car06g01503 06 14650685 14656759 Car01g00249 01 1866045 1871834 PCT