Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01499 ATGGGTGATGAAGTGTTCGTCGGAGAATACAAAATGGCGGGGGTACCCACCGGAGCTTCCCGACTCCGGCGAGCTGTGGAACTCATCTTCTCCCTGCTTACTCTATCTCTGTCGATCAGGGTCTTCGCCGGAAAATGGCAACTCATTAGGAACAAGCTTGAAGAACTTCATTCGGGTTTAATCGCCGCCGAGAACTCCGATTCCGGCGAGAATCCGTCGCTTTCAAGGTTAGTAACTTCGATAGTTGTGACTGTAAAAGAGTGTCACGATCTGGGTCAGCGTTGCGTGGATGTCTCGTATAGCGGGAAGCTTTTGATGCAGAGCGATTTGGACGTAGCGTTCGCGAAACTCGATGGTCTCGCGAAGAAGCTCTCTGAGATATACAAAACGGGTGTTTTAACAAATGGGTCTGCGCTCGTTGTTTCAAAACCGAGTCTTGGTGCTTCCAAAGAGGATATGAGGTTCTATGTGAGAGACCTTTTGACGAGGATGAAGATTGGTGATTTGGGGATGAAGAAACAAGCTTTGAGGAATCTTCTTGAGGTTGTGGTTGAAGATGAGAAGTATGTGAAGGTGATTGTTGTGGATGTGAGTGACGTTGTTCATGCGGTTGTTGGTTTTCTGGGTTGTGCTGAGGTGGAAATTCAAGAAGAGAGTACTAAGGTTGTTTCTGTGGTTGCTGGTTTTGATTCCTATAAAGGGGTTTTGATTAGTGCTGGTGTTATTGCGCCTTTAATTCGGGTTTTGGATTGTGGTAGTGAGTTCGGGAAGGTAGCGTCTGCGAGGTGTTTGATGAAATTAACTGAGAATTCGGACAATGCTTGGGCTGTTTCTGCTCATGGTGGTGTCACTGCCTTGTTGAATATTTGTGGGAATGGTAATTGTAATGGAGATTTGGTTGGTCCTGCTTGTGGGGTTTTGAGAAATCTTGTTGGTGTTGATGAAGTAAAGAGGTTTATGGTTGAGGAGGGTGCTGTGTCTACGTTTATCAGTCTTGTGAAATCAAAGGAGGAAGCAATTCAAGTGAATTCAATAGGGTTCATTCAGAGTATTGCTTTTGGAGATGAATTGATTAGGCAAATGGTGATTAAAGAAGGTGGAATCCGCGCTTTGTTGCGTGTTTTGGATCCTAAATGGTCTTATTCTTCTAAAACAAAGGAAATAGCAATAAGGGCTATTGAGAGTTTGTGTTTTACCTCATCTAGTTCTGTAAGTATTTTGATGAATTATGGTTTTGTGGATCAGTTATTATATTATGTTCGAAATGGTGATGTTTCAATTCAAGAATTGGCTTTGAAAGTTGCATTCAAATTGTGTGGCACATCAGAAGAAGCTAAGAAAGCAATGGGTGATTCTGGTTTTATGGCTGAATTTGTTAAGTTTTTGAATGCGAAATCGTTCGAAGTTCGTGAAATGGCAGCGGAGGCACTCTCTGGAATGGTCATGGTACCTAGAAATAGGAAAAGATTTGTGCAAGATGACCATAACATAGCACTGCTTCTGCAATTGCTTGATCCAGAAGAAGGAAATTCAGGTAACAAAAAGTTCTTAATCTCTATCTTAATGTCATTGACCAGTTGCAATAGTGCAAGGAAAAAAATTGTTAGTTCTGGATATGCAAAAAACATAGACAAACTTGCAGAAGCTGAAGTTTCTTCTGATGCTAAAAAACTTGTCAAGAAGCTATCCACAAACAGATTTCGCAATATGTTGAATGGAATCTGGCATTCATGA 1734 0.4181 MGDEVFVGEYKMAGVPTGASRLRRAVELIFSLLTLSLSIRVFAGKWQLIRNKLEELHSGLIAAENSDSGENPSLSRLVTSIVVTVKECHDLGQRCVDVSYSGKLLMQSDLDVAFAKLDGLAKKLSEIYKTGVLTNGSALVVSKPSLGASKEDMRFYVRDLLTRMKIGDLGMKKQALRNLLEVVVEDEKYVKVIVVDVSDVVHAVVGFLGCAEVEIQEESTKVVSVVAGFDSYKGVLISAGVIAPLIRVLDCGSEFGKVASARCLMKLTENSDNAWAVSAHGGVTALLNICGNGNCNGDLVGPACGVLRNLVGVDEVKRFMVEEGAVSTFISLVKSKEEAIQVNSIGFIQSIAFGDELIRQMVIKEGGIRALLRVLDPKWSYSSKTKEIAIRAIESLCFTSSSSVSILMNYGFVDQLLYYVRNGDVSIQELALKVAFKLCGTSEEAKKAMGDSGFMAEFVKFLNAKSFEVREMAAEALSGMVMVPRNRKRFVQDDHNIALLLQLLDPEEGNSGNKKFLISILMSLTSCNSARKKIVSSGYAKNIDKLAEAEVSSDAKKLVKKLSTNRFRNMLNGIWHS 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01499 577 SMART arm_5 270 312 IPR000225 GO:0005515
Car06g01499 577 SMART arm_5 186 228 IPR000225 GO:0005515
Car06g01499 577 SMART arm_5 313 353 IPR000225 GO:0005515
Car06g01499 577 SMART arm_5 355 398 IPR000225 GO:0005515
Car06g01499 577 SMART arm_5 442 482 IPR000225 GO:0005515
Car06g01499 577 SMART arm_5 229 269 IPR000225 GO:0005515
Car06g01499 577 Gene3D - 156 568 IPR011989 -
Car06g01499 577 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 18 577 - -
Car06g01499 577 SUPERFAMILY ARM repeat 139 548 IPR016024 -
Car06g01499 577 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 18 577 - -
Car06g01499 577 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 281 325 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01499 Car-Chr6 14605203 14608177 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01499 140 372 U-box Gene Family AT2G23140 22.344 1.39e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01499 - - gmx:100809382 881.322