Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01493 ATGAGACGTTTTCCAAATCTTTTGGACACAAATAGGTATTTGGACACTCAAAATGAAGTTAAGAAGTTGTGTCCAGTTTGTCGAGGAACATGCAGTTGTAAGGACTGCTTGGCAAGTCAATGTAACGGCAGTGAAAGTAAGGCCTATTTGTCTGGTAAAAGTAGAGTTGACAGAATACTGCATTTTCATTATTTGATCTGCATGCTCCTTCCAGTACTGAAGCGATTAAGTGAAGACCGAGAAGCTGAGCTAGAAAGAGAAGCAAAAATTAGAAGGAAAAATATTTCTGATATTCAAATCAAGCAGGTTGAATTTGGCGGCAATGAAAATAATTACTGCAATCAGTGCAAAACACCCATCTTGGATCTCCATAGAAGCTGTGCTAGTTGTTCGTATAGCCTATGCTTAAGTTGTTGTGAGGACTTATGTCAAGGAAGGACTTCTGGAGAAATCAAGTCATCAATGTTGAAGCCACTTGATGGTTGTGTTGACAGTGGGGACCATATTGAACACGTATCATGCCCTCCTATGGAGCTTGGTGGTTGTGGTAAAGGTCTGCTTGATTTGAGATGCATTTTTCCCTCTACTTTGCTCAAAGAGATGGAAGCAAATGCAGAAGAAATTGTTTGCAGCTATGACTTTCCCGAAACTTTGGATAAAAGTTCAAGCTGCTCACTGTGTTTTGACACCGACCTCAATACTAGCAGGTATAAGCAGTTGCAGAAAGCAGCCCTTAGAAAAGATTCATCAGATAATTGCTTGTTTTGTCCCACAGTTTTGGACATCAGTGGTGATAACTTTGAGCACTTCCAGAAACACTGGGGAAAAGGCCATCCTATAGTGGTCCAAGATGTGCTCCAGAGTACATCAAACCTCAGTTGGAATCCACTGTTCATGTTCTGTACTTATCTCGAACAGAGCATTACAAAATATGAGAATAATAAAGACTTACTTGAATCCTGTTTGGATTGGTGTGAGGTGGAAATAAACATTAGGCAGTATTTTACCGGGTCTCTCAAATGTCGTCCTGAGAGGAACACTTGGCATGAGAAGCTGAAACTGAAGGGATGGCTGTCTTCCCAGGTATTCAAAGAGCAGTTTCCAGCTCATTTTTCTGAGGTAATTGATGCTCTACCAGTTCAAGAATACACGAATCCTGTGTCTGGTCTTCTGAATTTAGCTGCAAATTTTCCCCATGGGAGTGTGGAACATGACATTGGGCCATATATCTATATTTCGTATGGCTGTGTTGACAAAGAAGCCGATTCTGTGACAAAACTCTGCTATGACTCATATGATGTGGTTAACATTATGACACATTCTGCGGATGTTCCCCTCTCTACAGAACAACTTACAAAAATAAGAAAATTACTGAAAAAGCACAAAGCTCTGTGTCAAATGGAGTCTGTTGCTACTGAGCAGTTACTAGAACGGAAAGTGAAAGGAATGGCATTATCACATGGTAAAAAAATGGAACAAAAAGGCTTGCAGAGTACAATGAAAGAAGGAATGGAGTTTTTCAGGAAAGTCGAAAGAACATCTTGCATCTCAACTGAAGCTAAAAAAGCTTCTACTCAGTGTGTAGACAACAATATTTCACAGGATGGAGATTGCGGTATTTTTTCTGATTCTAATTCTGATTCTGATCCTGAACCCTCTCTTCACGGGACTGCTCATACCACCAAATTGTCAGCACACAATAATCCTAGAAGTCCCTTTGAAAGCTCAGACAATTATAAGAAAAAGTTAACTGAGCATTCTGGTGCCCAGTGGGATGTCTTTCGTAGACAAGATGTACCAAAGCTCATGGAATACCTCAAACGACACTGTGATGAACTTACTTATACCCATGACTATGACTATCACAAGAAGATGGTTCATCCAATTCTAGATCAGAGCATTTTTCTTGACAGTACTCACAAAATGAGACTGAAGGAGGAGTTTGAGATTGAACCGTGGACTTTCCAGCAACATGTTGGAGAAGCTGTCATCATTCCTGCCGGATGTCCATACCAGATAAGAAATTCTAAGTGTTGTGTTCATGCTGTATTGGAATTTGTGTCCCCTGAAAATGTTACTGAGTGTAGCCAGTTGATCGATGAAGTCCGACTGTTACCTGAAGGCCATAGAGCAAAAGTAGATAAGCTAGAGGTGAAAAAAATGGCACTACATAGCATGAGTACAGCAATTAAAGAAACACGTCAGCTTACATGCAAAACATGA 2223 0.4031 MRRFPNLLDTNRYLDTQNEVKKLCPVCRGTCSCKDCLASQCNGSESKAYLSGKSRVDRILHFHYLICMLLPVLKRLSEDREAELEREAKIRRKNISDIQIKQVEFGGNENNYCNQCKTPILDLHRSCASCSYSLCLSCCEDLCQGRTSGEIKSSMLKPLDGCVDSGDHIEHVSCPPMELGGCGKGLLDLRCIFPSTLLKEMEANAEEIVCSYDFPETLDKSSSCSLCFDTDLNTSRYKQLQKAALRKDSSDNCLFCPTVLDISGDNFEHFQKHWGKGHPIVVQDVLQSTSNLSWNPLFMFCTYLEQSITKYENNKDLLESCLDWCEVEINIRQYFTGSLKCRPERNTWHEKLKLKGWLSSQVFKEQFPAHFSEVIDALPVQEYTNPVSGLLNLAANFPHGSVEHDIGPYIYISYGCVDKEADSVTKLCYDSYDVVNIMTHSADVPLSTEQLTKIRKLLKKHKALCQMESVATEQLLERKVKGMALSHGKKMEQKGLQSTMKEGMEFFRKVERTSCISTEAKKASTQCVDNNISQDGDCGIFSDSNSDSDPEPSLHGTAHTTKLSAHNNPRSPFESSDNYKKKLTEHSGAQWDVFRRQDVPKLMEYLKRHCDELTYTHDYDYHKKMVHPILDQSIFLDSTHKMRLKEEFEIEPWTFQQHVGEAVIIPAGCPYQIRNSKCCVHAVLEFVSPENVTECSQLIDEVRLLPEGHRAKVDKLEVKKMALHSMSTAIKETRQLTCKT 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01493 740 Coils Coil 73 93 - -
Car06g01493 740 MobiDBLite consensus disorder prediction 539 574 - -
Car06g01493 740 PANTHER PROTEIN B160 11 160 - -
Car06g01493 740 PANTHER PROTEIN B160 168 739 - -
Car06g01493 740 SUPERFAMILY Clavaminate synthase-like 266 728 - -
Car06g01493 740 ProSiteProfiles JmjC domain profile. 386 703 IPR003347 -
Car06g01493 740 MobiDBLite consensus disorder prediction 539 578 - -
Car06g01493 740 Pfam JmjC domain, hydroxylase 587 681 IPR003347 -
Car06g01493 740 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 11 160 IPR045109 GO:0032454|GO:0033169
Car06g01493 740 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 168 739 IPR045109 GO:0032454|GO:0033169
Car06g01493 740 Gene3D Cupin 257 712 - -
Car06g01493 740 SMART cupin_9 367 703 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01493 Car-Chr6 14546122 14551941 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Car06g01493 JmjC 1e-08 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01493 K15601 - gmx:100810673 1105.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01493 06 14546122 14551941 Car01g00244 01 1824082 1829913 PCT