Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01489 ATGTTTAAGGACATGGGCATGATCATAGGATTCAAAGTTTCGATTTTTATGTTGTTGTCTTTCTTCTCTTTCCTCTGTTTTTATCCTCTGTTTTTGCATGCAGCCAACTCCATCAAACAGAACGAATCTATCAAAGATGGTTCCACTTTAGTGTCAGAAGGTCTCAAATTCGAAATGGGTTTCTTCAGTTTTGACAACTCCTCTTCGAGATACGTTGGAATTTGGTATCACAACATTCCAACTTCAGCATACGTTTGGGTTGCAAACAGAGAAAAACCCATCAGAAATAGAGAAGGTTCCATCACAATAAAAAATGATGGAAACTTGGTTGTTCTTGACGATAACAACAGTGAGGTTTGGTCAAGTAATATATCAATTCAGACAAAAAATTCTTCAGTTGTTCTTCGTAATGATGGAAACCTTGTTCTTTCAGATGCAGAAGTTGGAAAAGAGATTTGGCAAAGCTTTGAAGAACCAACTGATACATACCTTCCAGGTATGAAAGTTCCAGCAAGTGGTGGAAATGGAATTGAGAAGAATCAAAATCCAACCTTTTGGTCATGGAAATCAACAAAAGATCCTTCCTTTGGAAACTACACAATGAGTGTTGATTCTGATGCATCACCACAGATTGTGGTATTTGAAGGAGAAAAAAGAAGGTGGAGAAGTGGTTATTGGGATGGTAGAGTATTCACAGGTGTACCAAATATGACAGGAAGTTATCTTTTTGGTTTTAGACTCAACACAAATGATAAAGGTGGAAGGTATTTTGTGTATGAAGCATTGAATAATAGTGATAAGATAAGGTTTCAGATTGGTTGGGATGGATATGAGAGACAATTAAGGTGGAATGAAGATGAAAAAGAATGGAATGTGTTGCAAACTGAGCCTTCTAAAAAGTGTGAGTTTTATAATTCATGTGGTGGTTTTGCAGTTTGTGATGTTTCCCATTCACAAGTGTGTAGGTGCATACAAGGGTTTGAACCAACGGATATGAATAGTTGGAAAAACGGAAATTGGTCAAAAGGGTGTAAGAGAATGACTCCATTGAAGGCTGAGACAGGTAGTAATAGTTCTGGTGAAGATGGTTTTTTGGTGCAAAGGGATTTGAAGTTACCTGATTTTGCACATTTGGTGAATGCTGTTGATACTAATGAATGTGAAAATAATTGTCTGAAGAATAGTTCTTGTACTGCATATGCAAATGCTATTGGAATTGGATGCATGATTTGGTTTGGGGAGTTAGCTGATGTTCAAAGTTTAGAAAATTATGGAAATGCACTTAATATCCGTCTTGCTGATTCTGATTTAGGTGATGGAAAGAAAAAGACCAAGATTTGGATAATACTAGCTGTTGGGGTGGGACTGATTTGCCTTGGAATCTTTGCATGGCTAATATGGAGGTTTAAGAGAAAATTCAAAGTTTCCTCAACTACTTGTTCCAACACTAATGGTGATGATCAACCAATTTCTGAACCAATAAGGAGTAAAGACTTATCAGCAGAATTTTCAGGATCAGTTGATCTAAGCTTGGTAGGGAATCCGCTGAGTGGTGCAGAACTTTCATTGTTCAGTTTTAGTAGCATTGTAATAGCAACAAACAATTTCTCAGAAGAAAATAAGCTTGGACAAGGTGGATTTGGTCCTGTCTACAAGGGAAAGCTTCCAGAGGGAGAACAAATTGCTGTCAAGAGGCTTTCAAAACAGTCTAGCCAAGGTTCAGAAGAGTTCAAGAATGAAATGATGCTAATAGCTAAATTACAGCATGTAAATCTTGTTAGACTATTAGGATGTTCAATTCAAGGGGAAGAAAAGTTACTGGTATATGAATACATGCCAAACAAAAGTTTGGACTTCTTTTTATTTGATCCAGTGAAGCAAACAAAACTCGATTGGACGAGACGTTTTGAAATTATCGAGGGCATAGCAAGAGGACTACTTTATCTTCACCGAGATTCACGACTTAGAATCATCCATAGAGATCTAAAAGCAAGCAACATTTTGTTGGATGAAAATATGAATCCAAAAATTTCAGACTTTGGTTTGGCAAGGATATTTGGGGGAAACCAAAATGAAGCCAATACAGCTAGAGTAGTTGGTACATATGGATATATGTCTCCAGAATATGCAATGGAAGGTCTATTTTCGATCAAATCAGATGTCTATAGTTTTGGCGTACTACTACTAGAGATTGTGAGTGGCCGCAAAAACACCAGCTTTCGTCATTCATATGATCCAAGTCTCATAGGATATGCATGGCGTCTATGGAGTGAAGAGAGAGTAATGGAGCTTGTTGATCCTTTAATCCGTGATTCAAGTCCAAAGAGTAAAGCTATGAGATGCATACACATTGGAATGTTATGTGTGCAAGATTCAGCAACACATAGACCAAACATGTCGTCAGTGTTGTTAATGCTAGAAAGTGAGTCAACAACTCTTCCTTTGCCAAGTCAACCTTTGGTTACTTCCATGAGAAGATATACAGATACAGAAGAATTTCATACCCAACAAGATTCTTCGTATGATATCACAGTGAGTGACAGTGTAGTCACAGGGAGATAG 2562 0.3743 MFKDMGMIIGFKVSIFMLLSFFSFLCFYPLFLHAANSIKQNESIKDGSTLVSEGLKFEMGFFSFDNSSSRYVGIWYHNIPTSAYVWVANREKPIRNREGSITIKNDGNLVVLDDNNSEVWSSNISIQTKNSSVVLRNDGNLVLSDAEVGKEIWQSFEEPTDTYLPGMKVPASGGNGIEKNQNPTFWSWKSTKDPSFGNYTMSVDSDASPQIVVFEGEKRRWRSGYWDGRVFTGVPNMTGSYLFGFRLNTNDKGGRYFVYEALNNSDKIRFQIGWDGYERQLRWNEDEKEWNVLQTEPSKKCEFYNSCGGFAVCDVSHSQVCRCIQGFEPTDMNSWKNGNWSKGCKRMTPLKAETGSNSSGEDGFLVQRDLKLPDFAHLVNAVDTNECENNCLKNSSCTAYANAIGIGCMIWFGELADVQSLENYGNALNIRLADSDLGDGKKKTKIWIILAVGVGLICLGIFAWLIWRFKRKFKVSSTTCSNTNGDDQPISEPIRSKDLSAEFSGSVDLSLVGNPLSGAELSLFSFSSIVIATNNFSEENKLGQGGFGPVYKGKLPEGEQIAVKRLSKQSSQGSEEFKNEMMLIAKLQHVNLVRLLGCSIQGEEKLLVYEYMPNKSLDFFLFDPVKQTKLDWTRRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEANTARVVGTYGYMSPEYAMEGLFSIKSDVYSFGVLLLEIVSGRKNTSFRHSYDPSLIGYAWRLWSEERVMELVDPLIRDSSPKSKAMRCIHIGMLCVQDSATHRPNMSSVLLMLESESTTLPLPSQPLVTSMRRYTDTEEFHTQQDSSYDITVSDSVVTGR 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01489 853 SMART blect_4 41 159 IPR001480 -
Car06g01489 853 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 226 IPR036426 -
Car06g01489 853 Pfam D-mannose binding lectin 84 189 IPR001480 -
Car06g01489 853 ProSiteProfiles Protein kinase domain profile. 536 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01489 853 SMART ntp_6 359 432 IPR003609 -
Car06g01489 853 Gene3D Phosphorylase Kinase; domain 1 509 611 - -
Car06g01489 853 PIRSF SRK 8 853 IPR024171 GO:0004674
Car06g01489 853 ProSiteProfiles PAN/Apple domain profile. 344 433 IPR003609 -
Car06g01489 853 Pfam PAN-like domain 359 418 IPR003609 -
Car06g01489 853 Pfam Protein tyrosine and serine/threonine kinase 539 803 IPR001245 GO:0004672|GO:0006468
Car06g01489 853 Gene3D - 31 156 IPR036426 -
Car06g01489 853 SUPERFAMILY Protein kinase-like (PK-like) 521 831 IPR011009 -
Car06g01489 853 SMART serkin_6 536 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01489 853 CDD STKc_IRAK 542 807 - -
Car06g01489 853 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Car06g01489 853 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 12 853 - -
Car06g01489 853 ProSiteProfiles Bulb-type lectin domain profile. 35 156 IPR001480 -
Car06g01489 853 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 12 853 - -
Car06g01489 853 CDD PAN_AP_plant 356 433 - -
Car06g01489 853 Pfam S-locus glycoprotein domain 221 330 IPR000858 GO:0048544
Car06g01489 853 Gene3D Transferase(Phosphotransferase) domain 1 612 814 - -
Car06g01489 853 CDD B_lectin 41 159 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01489 Car-Chr6 14504469 14508415 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01489 513 819 Receptor kinase-like Gene Family AT4G23230 62.338 4.09e-133 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car06g01489 PK_Tyr_Ser-Thr 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01489 - - cam:101504189 1708.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01489 06 14504469 14508415 Car01g00231 01 1751847 1755727 PCT