Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01487 ATGAGAGGCTTCACTCTGTGTCTTCTTTGTCTCTCCACTTCAATCCTTTTTTTCTCCAAACCTTCAATCTCTGCTTCTGATACATTAACAACAACCCAATCGCTTAAAACCAACGAAACCCTCTTGTCACCAAACGGTATTTTCCAACTAAGTTTCTTTTCCTTCAACAATTTCACTTGGTACTTAGGAATACGTTACACCATCGACCATAAAAAAACAGTAGTTTGGGTAGCAAACAGAAACACCCCAATTCAAAATTTCAACGCTTTTCTCAAATTAACCGACGCAGGAAAACTCATCATCATCGATCAATCACAAAAAACCATTTGGGCCTCTAATCAAAGAACGAAAAATGCTACCTTTAACAACCCAATTCTTCAGCTTTTGGATTCTGGAAATTTGGTTGTAAAAGAATCGAACGAGAATGACCCAAcaaagtttatctggcaaagctttgattacccaacagatactttgttacctggcatgaaacttggttggaacTTCGACACAAACACAGAAACATTCATAAATTCATGGAAAGTAACAGATCAAGACCCTTCATTTGGAGACATATCTTTCAAAATGGATTATCACGGTCTTCCAGAAATTTTTCTTTTGGACAAAGGTAGAAGAATTTATAGAAGTGGACCTTGGAATGGTAAAAGATTCAGTGGCGTTCCAGAGATGCAACCTGTTACAGATTCAATAAAATTCAATTTTGTTGAAAATGAACATGAAGTTTTCTACACATTCTCAATTGGGAATGAATCTTTGTTTTCAAGACTGAGTGTGAATTCATTAGGTAAACTTCAAAGACTTACATGGATACAAAGTGGACAACTTTGGTCAACATTTTGGTATGCACCAAAAGACCAATGTGACAATTATAGAGAGTGTGGTCCATATGGTATATGTGACACAAATGCTTCACCTGTTTGTCAGTGTGTGAAAGGTTTTAGACCAAAGAATCATCAAGCATGGAATTTGAGAGATGGATCTGATGGGTGTGTGAGGAATAATGAATTGGATTGTGGAAGTGATAGGTTTTTGAAATTGGTGAATGTGAAGTTGCCAGAGACAAGCAGTGTATTTGTGAATAGGAGTATGAGTGTTTTTGAATGTGGAGAATTTTGTAAGAGGAATTGTTCTTGTACAGGTTATGCTAATATTGAGATTGTTGATGGTGGAAGTGGTTGTGTTATGTGGCTTGATGAACTCATTGATATTAGATTGTATCCTTCTGGTGGACAAGATCTCTTTGTCAGATTATCAGCTTCTGATGTAGAGGAAGATGAGGCAAGAGAAAGTTCTGATCACAAGACAGCTAAGGCTATAGGCATTATGGTTGGGGGTGCAGCTATTATATTTTTGATAATAGGAATATGTTTCTTGTGGAGGAAGAAGAAATTGCAGTGTCTATTCAAAATGAAAAGCGAAAAAAGAGCTTCATTGGAAAGAAGTCAGGATTTGCTTATGACTGAGGGGGTGTTTACAAGTAATAGAGAACAATCAGGTGAAAATAACCTGGATGATCTTGAATTGCCATTCTTTGATTTTAATACCATAACATTGGCTACAAACAATTTCTCTGAAGAAAATAAACTTGGACAAGGAGGATTTGGTATTGTTTACAAAGGTAGGTTGATCGAAGGTCAGGAAATTGCTGTGAAGAGATTATCGAAAAATTCCGGCCAAGGGGTTGATGAATTTAAGAACGAGGTCAAGTTGATTGTCAAGCTTCAACATCGAAATCTTGTTCGGCTACTTGGCTGCAGCATTCAAATAGACGAGAAGATGCTAGTGTATGAGTACTTGGAAAATAGAAGCCTTGATGCCATTTTATTTAACAAAACTAAAAGAGCCTTGCTCGATTGGCAAAGACGCTTCAAAATTATATGCGGAATTGCTAGAGGACTTCTTTATCTTCATCAGGATTCCCGATTTAGGATCATCCATAGAGATCTTAAAGCAAGCAACATTCTACTTGACAAAGAGATGAATCCGAAGATATCAGACTTTGGGATGGCTAGAATTTTCGGCACGGACCAAACAGAGGCGAATACAGTTAGAGTTGTTGGAACATATGGCTATATGTCTCCTGAATATGCTATGGATGGAATCTTCTCAGTAAAATCTGATGTTTTTAGTTTTGGCGTTCTTGTGATGGAGATTATAAGTGGAAAAAAGAACCGGGGTTTTTATTCCGCGAACAAAGAATTGAATCTTCTTGGCCATGGGTGGAATCTGTGGACAGAAGGAAAAGCTTTGGAACTTATTGATTCATCCATTGATAATTCATATTCACAATCTGAGGTTCTTAGATGCATACAAGTTGGATTATTATGTGTACAAGAGAGAGCAGAAGATAGGCCAACAATGTCTTCAGTGGTTTTGATGTTGAGTAGTGAAACAGCAACAATAACACAGCCTAAAAACCCTGGGTTTTGTCTAGGAAGCAATCCTATAGAAACTGATTCTTCCTCAAGTAAACAAGAGGAATCTTGCACTGTGAACCAAGTTACTGTCACAATGTTAGATGGTAGATAG 2550 0.362 MRGFTLCLLCLSTSILFFSKPSISASDTLTTTQSLKTNETLLSPNGIFQLSFFSFNNFTWYLGIRYTIDHKKTVVWVANRNTPIQNFNAFLKLTDAGKLIIIDQSQKTIWASNQRTKNATFNNPILQLLDSGNLVVKESNENDPTKFIWQSFDYPTDTLLPGMKLGWNFDTNTETFINSWKVTDQDPSFGDISFKMDYHGLPEIFLLDKGRRIYRSGPWNGKRFSGVPEMQPVTDSIKFNFVENEHEVFYTFSIGNESLFSRLSVNSLGKLQRLTWIQSGQLWSTFWYAPKDQCDNYRECGPYGICDTNASPVCQCVKGFRPKNHQAWNLRDGSDGCVRNNELDCGSDRFLKLVNVKLPETSSVFVNRSMSVFECGEFCKRNCSCTGYANIEIVDGGSGCVMWLDELIDIRLYPSGGQDLFVRLSASDVEEDEARESSDHKTAKAIGIMVGGAAIIFLIIGICFLWRKKKLQCLFKMKSEKRASLERSQDLLMTEGVFTSNREQSGENNLDDLELPFFDFNTITLATNNFSEENKLGQGGFGIVYKGRLIEGQEIAVKRLSKNSGQGVDEFKNEVKLIVKLQHRNLVRLLGCSIQIDEKMLVYEYLENRSLDAILFNKTKRALLDWQRRFKIICGIARGLLYLHQDSRFRIIHRDLKASNILLDKEMNPKISDFGMARIFGTDQTEANTVRVVGTYGYMSPEYAMDGIFSVKSDVFSFGVLVMEIISGKKNRGFYSANKELNLLGHGWNLWTEGKALELIDSSIDNSYSQSEVLRCIQVGLLCVQERAEDRPTMSSVVLMLSSETATITQPKNPGFCLGSNPIETDSSSSKQEESCTVNQVTVTMLDGR 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01487 849 Pfam Receptor serine/threonine kinase 486 520 IPR022126 GO:0004674
Car06g01487 849 CDD B_lectin 32 155 IPR001480 -
Car06g01487 849 SUPERFAMILY Protein kinase-like (PK-like) 512 801 IPR011009 -
Car06g01487 849 ProSiteProfiles PAN/Apple domain profile. 345 425 IPR003609 -
Car06g01487 849 Gene3D Transferase(Phosphotransferase) domain 1 606 813 - -
Car06g01487 849 Gene3D Phosphorylase Kinase; domain 1 504 605 - -
Car06g01487 849 ProSiteProfiles Protein kinase domain profile. 530 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01487 849 Pfam Protein tyrosine and serine/threonine kinase 533 799 IPR001245 GO:0004672|GO:0006468
Car06g01487 849 ProSitePatterns Protein kinases ATP-binding region signature. 536 558 IPR017441 GO:0005524
Car06g01487 849 Pfam Domain of unknown function (DUF3403) 803 849 IPR021820 GO:0004674
Car06g01487 849 PIRSF SRK 1 849 IPR024171 GO:0004674
Car06g01487 849 ProSiteProfiles Bulb-type lectin domain profile. 26 149 IPR001480 -
Car06g01487 849 CDD STKc_IRAK 536 801 - -
Car06g01487 849 SMART blect_4 32 155 IPR001480 -
Car06g01487 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Car06g01487 849 Pfam D-mannose binding lectin 73 181 IPR001480 -
Car06g01487 849 Pfam S-locus glycoprotein domain 214 324 IPR000858 GO:0048544
Car06g01487 849 Pfam PAN-like domain 345 410 IPR003609 -
Car06g01487 849 SMART ntp_6 345 424 IPR003609 -
Car06g01487 849 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 181 IPR036426 -
Car06g01487 849 CDD PAN_AP_plant 343 425 - -
Car06g01487 849 SMART serkin_6 530 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01487 849 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 848 - -
Car06g01487 849 Gene3D - 22 152 IPR036426 -
Car06g01487 849 PANTHER - 13 848 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01487 Car-Chr6 14491132 14496623 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01487 459 849 Receptor kinase-like Gene Family AT4G23140 52.369 6.47e-132 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car06g01487 PK_Tyr_Ser-Thr 4.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01487 - - cam:101504189 1699.87