Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01486 ATGAAAGAGCTTATTCTTCTGCTGTTGATCCTTTATTACCCTTTTTGCCACTCACTCgacaccataacactaaaccattcaattaaagacggcgacgttttggtctccagcgatcgaggaacattcgcacttggtttcttcaccctccacccagattccaaaactcgataccttggtatatggtacaacaaaatttcagagcaaaccattgtgtgggttgcaaacagagaCACTCCTCTCAACGACAATTCGTCTGTTCTCTCCATCAAAAACGGAAACCTCGTACTCCACAGCAACAACAACCTTAACCCCGTTTGGTCTTCCAACGTTTCTACCTCATTTGTGAATGCTTCAGCTAAGCTTTTGGACACAGGAAACTTCATTTTGACTCATAATAATAACGTTGTGTGGCAGAGTTTTGATTCTCCAAGTAACACTTTACTTCCTTTCATGAAACTCGGCTTGGACCGTAAAACCGGTTTGAACCGGTTCCTCACATCGTGGAAATCCCCAAATGATCCAAGAACCGGGAATTTAACATACCGGATCGACCCGACCGGGTTTCCCCAACTATTTCTCTACAGAAATAAAATTCCAATTTGGAGAACCGGGTCTTGGACGGGTCAAAGGTGGAGTGGTGTACCCGAAATGACTCCGATTTTCATCTTCAATGTTACTTTTGTGAATAATAAAGATGAAATTTCGATAGAGTATAATGTGAAGGATCCGAATGTGTTGTCTAGAATGGTTCTGGAAGAACCGGGTCAAGTGAGGAGGCTGACGTGGCAACCTAACGAACATAGGTGGTTTCAAATCTGGCACGGTCCGAAAGAGGAATGTGATAATTTTAAACAATGCGGGTCGAACTCAAATTGTGACCCGTATAACGCGGAGAAGTTCGAGTGCGAGTGTTTTCCCGGGTACGAACCGAAATTCGGGCGAGAGTGGTATTTGAGAGACGGGTCGGGTGGGTGTGTGAGGAAGGGGAATGCTTCCATGTGTAGAAGTGGGGAGGGGTTTGTGAAAGTGGCACGTGTGAAGGTGCCGGATAGTTCGAAGGCACGTGTGAATGGAAGTTTGGGTTTGAGAGAATGTAGAGAGGAATGTTTGGGGGATTGTTCTTGTGTGGCTTATACAAGTGAAAATGAGAGCAGTGAGAGTGGATGTGTTACTTGGCATGGAGATATGGAGGATACGAGAAGTTACACACAACTTGGACAAGATTTGTACGTACGTGTAGATAAGCATGAATTAGCTATGTATGCAAAACACTCCTATGGTTCTCTTGGCAAAAAGGGATTGGTGGCAGTTTTAGTCATTTGTACTTGCTTGGTATTGTCTATTGCTATCATTTTGATCTCTTGGTTAGTAAAAGCCAGAAAACAATGGACGAGAAGAAAGGATCACAAGTATTCCTTTCGTCTCACCTTCGATGACTCTTCTGATCAACAAGAATTTGAGAGTACAAACAGTTCAAATTTACCATTCTATGATCTTAACTCCATAGCTTCTGCAACAGACAATTTCTCAATGGCTAACAAGCTTGGCCAAGGTGGTTTTGGTTCTGTTTATAAGGGTATATTGAGCAACGGAATGGCGATTGCGGTGAAGAGACTGTCAAAATATTCTGGACAAGGCGTAGAAGAGTTTAAAAACGAGGTTGTTTTGATTTCAAAACTCCAACACAGAAATCTTGTGAGGATCTTAGGTTGTTGCATTCAAGGAGAAGAGAAGATGTTAATCTATGAGTATTTGCCTAACAAAAGTTTGGACTTTTTCATTTTTGATAAATCTAAAAGTTCAGAACTAGATTGGAGAAAGCGATTCGATATTATTTGtggtattgctagagggatcttataccttcatcatgactcacgattaagaatcattcatagagatttaaaggccagtaatgtcttgctagacaatgcattgaacccgaaaattgcagattttggtatggctagaatgtttggcggagaTCAAATTGAAGCAGTTACTAATCGTGTCGTTGGAACCTATGGTTATATGTCTCCAGAATACGCGATGGAAGGACAATTTTCAGTAAAATCTGATGTATACAGCTTTGGAGTTTTACTCTTAGAGATTATTACCGGAAAAAAGAATAGTGGTCACCATGAAGACATTGCATCCACAAATTTAGTGGGACATATATGGGATCTATGGAAAGAAGGCACAACCATGAAGATTGTTGATCGATCATTAGGCGAGTCATTCTCTGAGGTTGAAGTCGAAAGATGCATCCAAATCGGGCTTCTATGTGTACAAGATTATGCTGTTGACAGACCATCTATGTCAGCTGTCGTTTCCATGTTGGGTAATGACTCAACTCTTCCTATTCCAAAACAACCAGCATTTAGTTTCAAGAAAAGTAATTGTGAGAGTTCAAATCCATCAACCAGTGAAGGAATTTACTCAGTAAATAATGTAAGTATGACTATGATTGAAGCTCGCTAA 2481 0.3567 MKELILLLLILYYPFCHSLDTITLNHSIKDGDVLVSSDRGTFALGFFTLHPDSKTRYLGIWYNKISEQTIVWVANRDTPLNDNSSVLSIKNGNLVLHSNNNLNPVWSSNVSTSFVNASAKLLDTGNFILTHNNNVVWQSFDSPSNTLLPFMKLGLDRKTGLNRFLTSWKSPNDPRTGNLTYRIDPTGFPQLFLYRNKIPIWRTGSWTGQRWSGVPEMTPIFIFNVTFVNNKDEISIEYNVKDPNVLSRMVLEEPGQVRRLTWQPNEHRWFQIWHGPKEECDNFKQCGSNSNCDPYNAEKFECECFPGYEPKFGREWYLRDGSGGCVRKGNASMCRSGEGFVKVARVKVPDSSKARVNGSLGLRECREECLGDCSCVAYTSENESSESGCVTWHGDMEDTRSYTQLGQDLYVRVDKHELAMYAKHSYGSLGKKGLVAVLVICTCLVLSIAIILISWLVKARKQWTRRKDHKYSFRLTFDDSSDQQEFESTNSSNLPFYDLNSIASATDNFSMANKLGQGGFGSVYKGILSNGMAIAVKRLSKYSGQGVEEFKNEVVLISKLQHRNLVRILGCCIQGEEKMLIYEYLPNKSLDFFIFDKSKSSELDWRKRFDIICGIARGILYLHHDSRLRIIHRDLKASNVLLDNALNPKIADFGMARMFGGDQIEAVTNRVVGTYGYMSPEYAMEGQFSVKSDVYSFGVLLLEIITGKKNSGHHEDIASTNLVGHIWDLWKEGTTMKIVDRSLGESFSEVEVERCIQIGLLCVQDYAVDRPSMSAVVSMLGNDSTLPIPKQPAFSFKKSNCESSNPSTSEGIYSVNNVSMTMIEAR 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01486 826 SMART ntp_6 335 413 IPR003609 -
Car06g01486 826 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 41 822 - -
Car06g01486 826 ProSiteProfiles Bulb-type lectin domain profile. 19 142 IPR001480 -
Car06g01486 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 208 IPR036426 -
Car06g01486 826 SMART blect_4 25 143 IPR001480 -
Car06g01486 826 Pfam Protein tyrosine and serine/threonine kinase 511 779 IPR001245 GO:0004672|GO:0006468
Car06g01486 826 ProSiteProfiles Protein kinase domain profile. 509 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01486 826 ProSiteProfiles EGF-like domain profile. 276 314 IPR000742 -
Car06g01486 826 CDD PAN_AP_plant 335 413 - -
Car06g01486 826 ProSitePatterns Protein kinases ATP-binding region signature. 515 537 IPR017441 GO:0005524
Car06g01486 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Car06g01486 826 CDD B_lectin 25 143 IPR001480 -
Car06g01486 826 SUPERFAMILY Protein kinase-like (PK-like) 493 792 IPR011009 -
Car06g01486 826 Gene3D Transferase(Phosphotransferase) domain 1 585 787 - -
Car06g01486 826 ProSiteProfiles PAN/Apple domain profile. 334 414 IPR003609 -
Car06g01486 826 Pfam D-mannose binding lectin 69 169 IPR001480 -
Car06g01486 826 PIRSF SRK 1 826 IPR024171 GO:0004674
Car06g01486 826 Pfam Domain of unknown function (DUF3403) 782 826 IPR021820 GO:0004674
Car06g01486 826 Gene3D Phosphorylase Kinase; domain 1 471 584 - -
Car06g01486 826 Pfam S-locus glycoprotein domain 201 312 IPR000858 GO:0048544
Car06g01486 826 CDD STKc_IRAK 515 780 - -
Car06g01486 826 Pfam PAN-like domain 334 398 IPR003609 -
Car06g01486 826 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 41 822 - -
Car06g01486 826 SMART serkin_6 509 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01486 826 Gene3D - 16 141 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01486 Car-Chr6 14484490 14487870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01486 469 826 Receptor kinase-like Gene Family AT4G11530 55.890 5.84e-131 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car06g01486 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01486 - - gmx:100812814 1324.3