Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01482 ATGGAACAAGGATATGACAATAGATTAAGTGTGTCTCTAGATGAGTTGTGTTTTAATGCTGAAAATGGAAGCACTAATAGGAGAATAATGAACAAGAAACACTATGATGATGATGGCAATAAAGTGTTCACATCAAAGAACCTTGAGACAGAAAGGAAGAGGAGGATGAAACTTAGTGCCAGACTTTTGAAGCTTAGATCTTTAGTACCCATCATCACAAATATGAACAAAGCAACTATTATTGAGGATGCTATCAGTTATATCATGCAGCTACAAAATGAAGTTGAGAGTCTTGCACAAGAGCTTCAAGAAATGGGAACAACCGCAGAGGAAGCAGGGCAAAAAATGTATGAACCTTCTGCTGCAGAAAAGATGAAGAAATGGGGGGTCCAGGAAGAGGTGGTGGAGTTGAAAAAAATTGATGAGAATAAGTTTTGGGTCAAGATGATCCTTGAGAATGAGAGGGGAAGGTTCACTAGATTAATGGAGGCCCTTAATGATTTAGGCATTGAAATGATGGACCCTAATGTTACAACAATGCATGGAGCATATCTTATTACAGCCTCTTTACAGAGCATGTTTGGTGCACTTGACATTCATCAAATTCCAAATATTATCAAGTTCAATTAG 630 0.3778 MEQGYDNRLSVSLDELCFNAENGSTNRRIMNKKHYDDDGNKVFTSKNLETERKRRMKLSARLLKLRSLVPIITNMNKATIIEDAISYIMQLQNEVESLAQELQEMGTTAEEAGQKMYEPSAAEKMKKWGVQEEVVELKKIDENKFWVKMILENERGRFTRLMEALNDLGIEMMDPNVTTMHGAYLITASLQSMFGALDIHQIPNIIKFN 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01482 209 SMART finulus 48 97 IPR011598 GO:0046983
Car06g01482 209 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 42 91 IPR011598 GO:0046983
Car06g01482 209 Gene3D - 40 107 IPR036638 GO:0046983
Car06g01482 209 Pfam Helix-loop-helix DNA-binding domain 48 92 IPR011598 GO:0046983
Car06g01482 209 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 9 196 - -
Car06g01482 209 Coils Coil 81 115 - -
Car06g01482 209 PANTHER TRANSCRIPTION FACTOR DYT1 9 196 - -
Car06g01482 209 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 46 111 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01482 Car-Chr6 14452128 14453662 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01482 26 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 46.023 3.93e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car06g01482 HLH 1.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01482 - - mtr:MTR_4g091910 217.238