Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01471 ATGAGCAGTATTCTCTTGATTTTGGCTATAGGAATAAGCATAGGCTTTGTGGTTGGAGTTGGTTTAGCATTTTCAATTTTAGTCATATTCAGGTGTGGAAGGAAGAGAATAGACGTGGAGAAGAATGGTCCTCGGAGAACCAAGTCCGTTCCTGTTCATGTCAAAGGGGTTGATTCTACTGCAGCATTATCAGACTCCAATGCGGCGCTTGAGTCGCCTAGAACATCTGAATGGAGTAACACACCTTTTTGGTTAGAAGGACTTAGGAGGAAGAATGTAGCCTCAGCATGTGGAATTCCTAAGTATTCTTTCAAAGATATAGAAAAGGCTACTTCTAATTTCACAACGATCATAGGCCATGGAGCATTTGGTTCTGTTTACAAAGCAGTCATGGCTACAGGTGAGACAGTTGCAGTTAAAGTTCTTGGTACTGATTCAAGTCAAGGAGAACAAGAATTTTTAACTGAGGTCCTATTACTTGGAAGATTACATCATAAAAACCTTGTGGGTTTGATAGGATATGCTGCAGAACGAGGACGGCATATGCTCCTTTACATTTACATGAGCAACGGAAGTCTTGCTTCTCATTTGTATGGCGAAAATCATGAGCCATTGAGCTGGGATTTGAGACTTAGCATAGCACTAGATGTTGCAAGGGTACTGGAATATCTACATTATGGGGCTGATCCACCTGTTGTTCACCGCGACATCAAGTCTTCCAACATTCTATTGGACCAGTTTATGAGAGCCAAGGTCACTGACTTTGGGCTTTCTAGACCAGAGATGATTATACCTCGTATGTCAAATGTCAGAGGAACATTTGGATATCTTGATCCTGAGTATATTTCTACAAGAACCTTCACTAAGAAAAGTGATGTTTATAGTTTTGGTGTGCTACTTTTTGAGCTTATTACTGGAAGGAATCCACAGCAGGGCCTCATGGAATATGTAAAACTAGCTGCCATGGAAAGTGAGGGCAAGATTGGATGGGAAGAAATTGTGGATCCACAATTGAATGGAAACTATGATATACATAAGCTTAATGATATGGCTTTCCTTGCATTCAAATGTGTCAATGAAGTCTCCAAAATTCGACCTTCAATGAGGAACATTGTTCAAGCCTTATCTCAACTTTATAACAAGCCTAGTATAAATTCTAACCGAGCATCTCCGTTTGCGCTAAGCGGAGTGACCATTGAAGTAGAACAGCAAGAAACTCAAGACTTTTCATCTATTGAGTGTTCGAAGGTGCTGAGCAGACTGCACAGCCGATAA 1275 0.4078 MSSILLILAIGISIGFVVGVGLAFSILVIFRCGRKRIDVEKNGPRRTKSVPVHVKGVDSTAALSDSNAALESPRTSEWSNTPFWLEGLRRKNVASACGIPKYSFKDIEKATSNFTTIIGHGAFGSVYKAVMATGETVAVKVLGTDSSQGEQEFLTEVLLLGRLHHKNLVGLIGYAAERGRHMLLYIYMSNGSLASHLYGENHEPLSWDLRLSIALDVARVLEYLHYGADPPVVHRDIKSSNILLDQFMRAKVTDFGLSRPEMIIPRMSNVRGTFGYLDPEYISTRTFTKKSDVYSFGVLLFELITGRNPQQGLMEYVKLAAMESEGKIGWEEIVDPQLNGNYDIHKLNDMAFLAFKCVNEVSKIRPSMRNIVQALSQLYNKPSINSNRASPFALSGVTIEVEQQETQDFSSIECSKVLSRLHSR 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01471 424 SUPERFAMILY Protein kinase-like (PK-like) 98 375 IPR011009 -
Car06g01471 424 Gene3D Phosphorylase Kinase; domain 1 86 187 - -
Car06g01471 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Car06g01471 424 PANTHER OS01G0253100 PROTEIN 3 410 IPR045271 GO:0004714|GO:0006468
Car06g01471 424 ProSitePatterns Protein kinases ATP-binding region signature. 118 140 IPR017441 GO:0005524
Car06g01471 424 CDD STKc_IRAK 118 378 - -
Car06g01471 424 SMART serkin_6 112 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01471 424 Gene3D Transferase(Phosphotransferase) domain 1 188 393 - -
Car06g01471 424 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 3 410 - -
Car06g01471 424 ProSiteProfiles Protein kinase domain profile. 112 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01471 424 Pfam Protein tyrosine and serine/threonine kinase 114 375 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01471 Car-Chr6 14221180 14225121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01471 98 377 Receptor kinase-like Gene Family AT3G19300 43.403 4.61e-74 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Car06g01471 PK_Tyr_Ser-Thr 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01471 - - gmx:100816549 605.52