Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01462 ATGCATTCTTGGCCACACGATCTTTCAATTAACGACTATTCTGCCTCAGTTTCTGTGTACACAACGACTTTTCAGATAAAAAGGGGTATTCTCTTGTATACATTCTTGTGCTTTTTGCTCAGTATCTTAATGACAAGTCATGGCATTGAGACTGATATACACTGCTTAAAATCCGTTAAGAATTCCTTGGAAGACCCTTTCAATCACTTACAAAACTGGAACTTCAACAATAAAACCGAAGGTTTCATATGTACATTTAATGGTGTTGAATGTTGGCATGATGATGAGAATAAAGTACTGAATCTCAAACTATCAAACATGGGGCTCAAGGGTCAGTTTCCACGTGGACTTGTGAATTGTTCTTCGTTGACAGGCTTAAACCTTTCAATGAATGAACTTTCAGGACCCATCCCAACTGATATATCAAATATAGTCACATTTATTACCACCATTGATCTCTCTTCTAACAAATTCACTGGTGAAATTCCATCATCTTTAGCAAACTGCTCTTACCTGAACGTTCTTAAACTTCACAGCAACATGTTAAGCGGTGAAATTCCAAAACAACTCAGCCAGTGCCGACCTTGCTCCTTCCATCAATATTTCAAGGCTGGTCTTATTGTTGGTTATGCTTTTTCAATCGTTTGTTCTGTTATACTCACTTGTATGTTCTACTCCAAATGTGCACCTTGGGTGCAATTGAACAAGAGAAAAAACAATCACCTGAACAAAGCTAAAGAATTTGGCAAATATATTTGCTCCATCACTAGCAAGAGGACACAAATGTTAGCTAATCAGATGCAAGAATTGTTGCATCTACCATTGGTACAGAAAGAAAGCAAAGAGATATCTGTACTATTTGGAAGACTCACATCAACAATATGGTTAGAAGAACTGAATTACGCAACTAACAATTTCGATGTAGACAATCTCATCGGGGTGGGAAAGATAGGAATGATGTACCAAGGAAGTGTACCTAATGGCCAATTACTAGCTGTTAAGAGACTATTCAATTCTCATCCTTTTGAAAGACAGTTCCTTTTAGAAACAATGATTATGGGTAGGTATAGACACAGAAATATAGTTCCAATGCTTGGATTCTGCGTTGAAGGAAAGGAAAGGCTATTGGCATACACATACATGTCAAATGGAAGGCTTTCCAAATGGTTAAATCCTTTGGAAAGTGAAGTTGTGAGATTGAAATGGCCTGAGAGGGTCAACATTGCACTTGGAATTGCAAGAGGTTTATCATGGCTCCATCATAGTTGTGATTTGTGCATAGTGCATTTTAATATATGTTCACAATGCATACTACTAGATGAGAATTTTGAACCCAAAATATCCAATTTTGGAGAGGCCAAATTCATGAATCCCAACATTGAGGATGATTTAGGCATAATGTTTAAAGTGAATGATGGGAAGAAGGATGTATATGACTTTGGAAGTGTGCTTTTTGAACTGTTTACAGGGAAACCATATAACGAATTGTCATGTTTGTCTGACGCTACTGACCGATATGGTAACCCTTTGGGTTTTTATAATGTAATTGATAAATCTCTAACTGGGGAAGGACTTGAAAATGAAGTTTGTACTCTCCTAAAGATTGCTTGTGAGTGTGTTCACCCTTTACCAGACCAAAGGCCAACAATGCTTGAAGTTTACAATAATCTGAGCAATGTAAGGAAGGGATAA 1692 0.3723 MHSWPHDLSINDYSASVSVYTTTFQIKRGILLYTFLCFLLSILMTSHGIETDIHCLKSVKNSLEDPFNHLQNWNFNNKTEGFICTFNGVECWHDDENKVLNLKLSNMGLKGQFPRGLVNCSSLTGLNLSMNELSGPIPTDISNIVTFITTIDLSSNKFTGEIPSSLANCSYLNVLKLHSNMLSGEIPKQLSQCRPCSFHQYFKAGLIVGYAFSIVCSVILTCMFYSKCAPWVQLNKRKNNHLNKAKEFGKYICSITSKRTQMLANQMQELLHLPLVQKESKEISVLFGRLTSTIWLEELNYATNNFDVDNLIGVGKIGMMYQGSVPNGQLLAVKRLFNSHPFERQFLLETMIMGRYRHRNIVPMLGFCVEGKERLLAYTYMSNGRLSKWLNPLESEVVRLKWPERVNIALGIARGLSWLHHSCDLCIVHFNICSQCILLDENFEPKISNFGEAKFMNPNIEDDLGIMFKVNDGKKDVYDFGSVLFELFTGKPYNELSCLSDATDRYGNPLGFYNVIDKSLTGEGLENEVCTLLKIACECVHPLPDQRPTMLEVYNNLSNVRKG 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01462 563 SUPERFAMILY Protein kinase-like (PK-like) 287 557 IPR011009 -
Car06g01462 563 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 198 559 - -
Car06g01462 563 Pfam Protein tyrosine and serine/threonine kinase 309 557 IPR001245 GO:0004672|GO:0006468
Car06g01462 563 PANTHER RECEPTOR-LIKE PROTEIN 55 28 191 - -
Car06g01462 563 Gene3D Ribonuclease Inhibitor 49 202 IPR032675 -
Car06g01462 563 SUPERFAMILY L domain-like 50 194 - -
Car06g01462 563 Gene3D Phosphorylase Kinase; domain 1 268 380 - -
Car06g01462 563 Pfam Leucine rich repeat N-terminal domain 50 92 IPR013210 -
Car06g01462 563 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 28 191 - -
Car06g01462 563 PANTHER RECEPTOR-LIKE PROTEIN 55 198 559 - -
Car06g01462 563 Gene3D Transferase(Phosphotransferase) domain 1 381 563 - -
Car06g01462 563 ProSiteProfiles Protein kinase domain profile. 306 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01462 Car-Chr6 14134346 14137528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01462 35 560 Receptor kinase-like Gene Family AT3G28450 35.889 2.40e-96 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Car06g01462 PK_Tyr_Ser-Thr 1.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01462 - - gmx:102664092 644.425