Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01445 ATGGAAACCTATCAATATCCACCGTCATATCCAGATTCCGGTAACTCATCGCCGCGTTCAAGAGATATTGATTTCGACAATCCAGCGTCATGGGAGGAGCAGCAGAACTACAAAGCCAAGTTCATGTGCAGCTACGGCGGGAAGATCCAACCACGCAGCCACGACAATCAGCTTTCCTACATCGGCGGCGACACCAAAATATTAGCCGTCGACCGCAACATCAAGTTTCAACACTTCTTCTCCAAACTCTCCTCCCTATGCGAAGCATCTCAACAAGATTTAAGCTTCAAGTACCAACTTCCGGGAGAAGAACTCGATGCTCTTATATCCGTCACAAACGAAGACGATCTCGAACACATGATGCATGAATACGATCGTCTCTATCGTCCTTCTTCAAAACCTGTTCGAATGAGGCTTTTCTTATTCATATCTCCGAATTCGGCTTCTGTTTCTCAACCCGACCCGCTTAAACCTCAATCCAACGTTGATTTCCTCTTCGGCCTCGAAAATAAAACCCTAGCTCCACCGCTTCACCCTCCTTCTTATGCTCCTTTGCCCGATCTTGTCGCTCCGACTCCTCAGTATCCGCCACGTGCACTCGCCGATGATAGGGTTGAGATTCAGGAGCAGTTACAGCGTTTGCAGGTTTCTGAGAATGAACAATCCTTGTATCGGAGAAGTGGAGATGGATTCTCCGGAGGTTATGCCGCGGCTCCCGGTGGCGATTATTACTTGCAGAAGATGTCAGAGAAAGTTGCACCGTCTAATTCGCCTACTGGTGTTCCTCATCCCGTGGGTTACTGGCCAGAAAAGCAATTTTCTACCGATAGTTTTTCGATTTCAGGGACGAACAATTCCGGTGGAGGTGACCAGCAGGTTTACATGATACCGGCGCCGGGGACATTCTATCACACAGCTCCGGTGATGCGTCCGCCGACAGCGCAGGTGAATCAGGGGTACTACGCGATGCAGGGAATGGTTTCTGATGGATACCGGGAACAGCAGGTGTACGGCGGTGTTCCGCCTCAGCAAGCAACGTTTTCATCAGCGGGTCAAGCACCGACTCAGCCGGTCAAACCCTCGGCGTATGCGGAAGGATACAATGTAGTTAGGCCAGGTGGTGTACCGGATAATGCGGGCGCTGCTGGGTATGCGCAGGTGGCGTATGATAGTGCAAGTGGGAGACATTTTTACTATACTGCGCCAGGAGGGATGGTCCACGCGCCGCAATACCAAGGGGTTGCTCCGGTTTTCAGCAATGACATGAGACCGACTACGGTTCCTGTGGGTCAGGATCCTAATAATAGAGGGGTAAGTAAGGGTTCACAAGGATCTGTGTGA 1341 0.5078 METYQYPPSYPDSGNSSPRSRDIDFDNPASWEEQQNYKAKFMCSYGGKIQPRSHDNQLSYIGGDTKILAVDRNIKFQHFFSKLSSLCEASQQDLSFKYQLPGEELDALISVTNEDDLEHMMHEYDRLYRPSSKPVRMRLFLFISPNSASVSQPDPLKPQSNVDFLFGLENKTLAPPLHPPSYAPLPDLVAPTPQYPPRALADDRVEIQEQLQRLQVSENEQSLYRRSGDGFSGGYAAAPGGDYYLQKMSEKVAPSNSPTGVPHPVGYWPEKQFSTDSFSISGTNNSGGGDQQVYMIPAPGTFYHTAPVMRPPTAQVNQGYYAMQGMVSDGYREQQVYGGVPPQQATFSSAGQAPTQPVKPSAYAEGYNVVRPGGVPDNAGAAGYAQVAYDSASGRHFYYTAPGGMVHAPQYQGVAPVFSNDMRPTTVPVGQDPNNRGVSKGSQGSV 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01445 446 Coils Coil 200 220 - -
Car06g01445 446 MobiDBLite consensus disorder prediction 423 446 - -
Car06g01445 446 PANTHER OS05G0427100 PROTEIN-RELATED 1 437 - -
Car06g01445 446 Pfam PB1 domain 54 142 IPR000270 GO:0005515
Car06g01445 446 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P (PB1) DOMAIN PROTEIN 1 437 - -
Car06g01445 446 MobiDBLite consensus disorder prediction 424 446 - -
Car06g01445 446 CDD PB1_UP2 42 142 - -
Car06g01445 446 SMART PB1_new 53 144 IPR000270 GO:0005515
Car06g01445 446 Gene3D - 59 144 - -
Car06g01445 446 SUPERFAMILY CAD & PB1 domains 54 151 - -
Car06g01445 446 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01445 Car-Chr6 13990193 13991814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01445 37 145 MAP Kinase Kinase Kinase AT5G57610 43.119 6.09e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01445 - - adu:107480527 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01445 06 13990193 13991814 Car01g00191 01 1449723 1451710 PCT