Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01434 ATGTCTCCTTTGCATATTAGTCTTCACACTCGAACTCTTGTTTTATGTTATTATGCAATAATCCATGTTGCTAATTCACTATCATTTGATTACCCTTATTTTAAGAATGGTGATGTTAATTGGGAAGGAGATGCTTCTCCTTATAAAGGAACTATCCAAATAACATCCAACAGCCTTGACCAAAACAACAATTACAGCGTCGGTCGTGTCACGAGTTTGGAACAGATGCTCCTTTGGGATTTGAGCTCAGGAAAGCTCTCTGACTTCACCACCAAATTCTCCTTTGTTGTTTTTTCAAAAACAAGTAATTATGGTGATGGAATGGTATTCTTCATGGCTGATCCAAATCTCCCACTTTTGAAGAATATCAAAGAAGGTGGTGGTCTTGGCCTTGTGGATGGAGACCAACTACTGAATTCAACTCAACACTCTTTTGTGGCACTTGAATTTGATACCTTCAATAATCCATCATGGGATCCTTTTGGTCAAGGCCCTCATGTTGGTTTCAATTTCAACTCCATGAGGTCTATTATAACTAAGCCATGGTTTACTAATATTCTACAATGGAGTGTTTATAATTGCAGCATTCACTACAATTCAACCACTTTTAATTTGAGTGTTTCATTCACCATGTACAGCGACGATAAACCAGTTGAAGATTACATATCATACAAGGTTGATTTAAGAGATTTCTTACCTGAGAAGGTTATTGTTGGCTTCTCTGCTGCAACAGGAATATTGTATGAGGTGCATACGCTTCGATCGTGGTCGTTTCATTCAAGTTTATTACGTGATGAAACCCGATATCAGATAACCGCGCCAATCACTAGTCCTATTTCTGGAAAAGAAAACAAGATAGGATTGAAAATCGGGCTTGGAATCGGTACAGGCTTGGCTGCGAGTTTGTCTGGATTGATTTGTACTCTATTATGGAAGAGGAGTAAAAGGAGAAAAGAAGAGTTTAGTTTTGATCTCAACATGGATGATGAATTCCAAAAAGGAACTGGACCTAAGAGATTTTCCTACAATGAACTAATGAGTGCAACAAACAAATTTTCAGAAGCATATAAGGTAGGACAAGGTGGTTTTGGTGGTGTATACAAAGGTTATTTGAAAGAGTTGAATTCTTATGTTGCTATCAAGAGGATATCAAGAGAGTCAAGACAAGGAATACAAGAATATGCAACTGAAGTTAAGGTCATAAGCCAATTGAGACACAGGAATCTTGTACAACTTCTTGGTTGGTGTCACAAAAAGAATGATTTTCTTCTTGTATATGAGTTTATGTCAAATGGAAGCTTAGATTCTCATCTATATGGTGACAAAAGCTCTTTGACATGGACAGTGAGGTATAAGATAGCATTCGGTTTGGCTTCAGCGTTGCTTTATTTACAAGAAGAATGGGAGCAGTGTGTGATTCATAGAGATATTAAATCAAGTAACATTATGTTGGATTCATGTTTCAATGCTAAGCTTGGTGATTTTGGTTTAGCTAGGCTTGTTGATCATGAAAAAGGGTCACAaactacacttatagctgggacaagagaTTATTTATTTAGGCCTTGTATAAGGCATGTGATTCAGGTTCTCAAATTTGAGTCTCCTTTGCCAATTCTTCCAGAAAAAATGCCTGTGCCAACTTATTTTCCTTCAACAATGAAAACACTTTTTTCCTCAGTTTCGTCCACCTATTGGACAAAAAGTTAG 1710 0.3649 MSPLHISLHTRTLVLCYYAIIHVANSLSFDYPYFKNGDVNWEGDASPYKGTIQITSNSLDQNNNYSVGRVTSLEQMLLWDLSSGKLSDFTTKFSFVVFSKTSNYGDGMVFFMADPNLPLLKNIKEGGGLGLVDGDQLLNSTQHSFVALEFDTFNNPSWDPFGQGPHVGFNFNSMRSIITKPWFTNILQWSVYNCSIHYNSTTFNLSVSFTMYSDDKPVEDYISYKVDLRDFLPEKVIVGFSAATGILYEVHTLRSWSFHSSLLRDETRYQITAPITSPISGKENKIGLKIGLGIGTGLAASLSGLICTLLWKRSKRRKEEFSFDLNMDDEFQKGTGPKRFSYNELMSATNKFSEAYKVGQGGFGGVYKGYLKELNSYVAIKRISRESRQGIQEYATEVKVISQLRHRNLVQLLGWCHKKNDFLLVYEFMSNGSLDSHLYGDKSSLTWTVRYKIAFGLASALLYLQEEWEQCVIHRDIKSSNIMLDSCFNAKLGDFGLARLVDHEKGSQTTLIAGTRDYLFRPCIRHVIQVLKFESPLPILPEKMPVPTYFPSTMKTLFSSVSSTYWTKS 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01434 569 SMART serkin_6 352 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01434 569 Gene3D Transferase(Phosphotransferase) domain 1 429 535 - -
Car06g01434 569 SUPERFAMILY Protein kinase-like (PK-like) 337 519 IPR011009 -
Car06g01434 569 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 270 IPR013320 -
Car06g01434 569 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE 13 519 - -
Car06g01434 569 CDD lectin_legume_LecRK_Arcelin_ConA 27 262 IPR001220 GO:0030246
Car06g01434 569 Gene3D - 24 274 - -
Car06g01434 569 Gene3D Phosphorylase Kinase; domain 1 337 428 - -
Car06g01434 569 ProSiteProfiles Protein kinase domain profile. 352 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01434 569 Pfam Legume lectin domain 26 262 IPR001220 GO:0030246
Car06g01434 569 PANTHER - 517 568 - -
Car06g01434 569 PANTHER - 13 519 - -
Car06g01434 569 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE 517 568 - -
Car06g01434 569 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Car06g01434 569 ProSitePatterns Legume lectins alpha-chain signature. 232 241 IPR000985 -
Car06g01434 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Car06g01434 569 Pfam Protein kinase domain 354 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01434 Car-Chr6 13931411 13933390 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01434 13 519 Receptor kinase-like Gene Family AT5G10530 43.822 1.71e-131 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Car06g01434 Lectin_legB 1.8e-55 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01434 - - gmx:100780181 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01434 06 13931411 13933390 Car06g01434 06 13931411 13933390 ECH