Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01432 ATGGTTGATTGTTATGAAAGCATAACCTTTTTGTTCCTCCTCATAATCCCTCTTACCAATTCTAAGTCTCAGTCTTTTAATTTTCCTTACTTCAGCCAAATGAATGTAAACTTAAACCAGATAAAACTAGAGGGCAATGCTTCAATATCAGGTTCAAGTATCCAACTCACAACGGAGCATGTTGGAAATGACAGCACCAACGGAGTTGGAACCATCGGTCGAGTAAGATATCATGAGTACATTCATCTTTGGGATAATAACACAGGACAACAAGTTGATTTCACTACCAATTTTTCCTTTGTTATTTCCTCAAGTGAAGGTGCTTATGGTGATGGTTTAATGTTCTTCTTAGCGAACCCGGAACTTCTAAACGAAAACATGATGGTAAAACAAGCAGGTGGTGGACTTGGTATTGATGTTGTTGATGGTAACCAAAATATTCTTGTAGATGGTTATAATCAGTTTGTGGCATTGGAGTTTGATACTTTTTCTAATGATTGGGACCCCGATGGCGCGCACGTTGGTTTGAATGTGAATTCTGTTATGTCAGTTATACTTGAAGAATGGAGCACAGATATTCCAAATGATAGAGTTTATAATTGCAGTGTTGAATACAATTCAAGAAGTAGTTATTTGAATGTTTCTTTCACTGGTTATGGATTTGAAGGTGTGCCTATAACAAAGTACTTTGGATACCACATTAATATCACAGAACATTTACCTGAGTCTGTTGTAATTGGTATATCAGCTTCAACAGgaaaaaaagaagaatcaagttcagaaactggttctgtTGTGAAAATGGACTATGAATTTCAAATGAGCACTGGACCTAAGAAGATATGTTATTATGAATTGTTGAATGCAACAAACAACTTTGAAGAGAAGCATAAGCTTGGACAAGGAGGTTTTGGTGGTGTTTATAAAGGTTACTTGAAAAGGACTAATTCATATGCAGCTATAAAGAGGATATCTTCAGATTCAAGGCAAGGTATAAAGCAATATGCAGCAGAAGTGATGATTATAAGTCAATTAAGGCATAGAAATTTGTTGAAACTCATTGGTTGGTGTCATAGGAACCATGATTTCATTCTGATCTACGAGTTCATGCCGAATGGAAGCTTAGATTCTCATCTTTTTCGCGGAGAAAGTATATTGCCGTGGAATTTAAGATACAATATAGCTCTTGGTTTGGCATCAGCATTGCTTTATTTGCAGGAAGAATGGGAAAAATGTGTGATTCATAGGGACATAAAATCAAGTAACATAATGTTGGACTCTAACTTTAATACCAAGCTTGGTGATTTTGGTCTAGCTAGGTTGATGGATCATGAGAAAGTGTCAGAAACTACACATGTGGCTGGAACAATAGGTTATCTAGCTCCTGAATATATGAAAACAGGGAAGGCTAGAAAAGAATCTGATATATTCAGTTTTGGAGTTGTTTTGTTGGAGATAGCCACTGGAAGAAAAGCTATTCTACAACAAGATTGGGATTTGGAGGGTCAAGTTTCATTAGTTGAGTGGGTTTGGGAACTCTATGCATTGAAAAATATTATTGCAGCTGCAGATCCTAAGTTATGTGAGGTATTTGATGTGAAGCAAATGGAATGTTTGTTGGTTGTTGGTCTTTGGTGTGCTAATCCTGATTCTAGCTCAAGACCATCTATAAGGGAAGCAATTAATGTGCTTAATTTTGAAGCTCCTTTACCTATTCTTCCACAAAATGTGCCTATGCTAGCTCTTTTCCCTCCCATAAGAAGAAATGATATTTTTTACTCAGTTCCCTCTTTCTTTAGGACTACTACTGGTTAA 1815 0.3576 MVDCYESITFLFLLIIPLTNSKSQSFNFPYFSQMNVNLNQIKLEGNASISGSSIQLTTEHVGNDSTNGVGTIGRVRYHEYIHLWDNNTGQQVDFTTNFSFVISSSEGAYGDGLMFFLANPELLNENMMVKQAGGGLGIDVVDGNQNILVDGYNQFVALEFDTFSNDWDPDGAHVGLNVNSVMSVILEEWSTDIPNDRVYNCSVEYNSRSSYLNVSFTGYGFEGVPITKYFGYHINITEHLPESVVIGISASTGKKEESSSETGSVVKMDYEFQMSTGPKKICYYELLNATNNFEEKHKLGQGGFGGVYKGYLKRTNSYAAIKRISSDSRQGIKQYAAEVMIISQLRHRNLLKLIGWCHRNHDFILIYEFMPNGSLDSHLFRGESILPWNLRYNIALGLASALLYLQEEWEKCVIHRDIKSSNIMLDSNFNTKLGDFGLARLMDHEKVSETTHVAGTIGYLAPEYMKTGKARKESDIFSFGVVLLEIATGRKAILQQDWDLEGQVSLVEWVWELYALKNIIAAADPKLCEVFDVKQMECLLVVGLWCANPDSSSRPSIREAINVLNFEAPLPILPQNVPMLALFPPIRRNDIFYSVPSFFRTTTG 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01432 604 SMART serkin_6 293 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01432 604 Pfam Protein kinase domain 293 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01432 604 ProSiteProfiles Protein kinase domain profile. 293 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01432 604 PANTHER - 11 257 - -
Car06g01432 604 PANTHER - 257 602 - -
Car06g01432 604 Gene3D Transferase(Phosphotransferase) domain 1 370 580 - -
Car06g01432 604 Gene3D Phosphorylase Kinase; domain 1 279 369 - -
Car06g01432 604 ProSitePatterns Protein kinases ATP-binding region signature. 299 322 IPR017441 GO:0005524
Car06g01432 604 CDD STKc_IRAK 299 565 - -
Car06g01432 604 PANTHER LECTIN RECEPTOR KINASE 257 602 - -
Car06g01432 604 SUPERFAMILY Protein kinase-like (PK-like) 277 593 IPR011009 -
Car06g01432 604 Pfam Legume lectin domain 24 256 IPR001220 GO:0030246
Car06g01432 604 PANTHER LECTIN RECEPTOR KINASE 11 257 - -
Car06g01432 604 Gene3D - 21 278 - -
Car06g01432 604 CDD lectin_legume_LecRK_Arcelin_ConA 25 253 IPR001220 GO:0030246
Car06g01432 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Car06g01432 604 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 256 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01432 Car-Chr6 13919233 13921239 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01432 8 579 Receptor kinase-like Gene Family AT5G10530 40.752 2.44e-152 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Car06g01432 Pkinase 5.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01432 - - mnt:21388254 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01432 06 13919233 13921239 Car06g01432 06 13919233 13921239 ECH