Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01429 ATGGCAGCATCTTACTACTCTCAGAAAAGTCATGGTGTTGTTTTTCATGTAACAATAGTATCAGTCTTGCTTCTTGTAACATCTCGTGCAGCTCCATTATCATTCAACTATGAACAATTTAGTGGTGACATGACAAACGCCTTCAATTTTTCAGGAGATGTCTATCAAGAGAAACAAGTCCTCCAACTCACTAAGTATGAGAAAGACAGTCTAGGTAGAGTCATATATTCCAAACTGTTTCATCTTTGGGACATAAATACAAGTCAAGTCACAGACTTCACTACTAGTTTCTCTTTTACTATTAACACCCCTAACAAAACCCATCGTGGAGATGGCATCACTTTCTTTCTAGCATCCCCCAATTTTCCACTACCTGCTCCAAGAGATGGAAGTGGTATTGGTCTCATTAGCCGTGCTCAAAAGGATAATCCAAATTTCTCAAAAGAAAATCACTTTGTAGCTGTGGAATTTGATACTGTTGTTAATGATTGGGATCCTACATATGACCATGTGGGGATTGATGTTAATGCTATCAACACTTCTTACACTACACAATGGTTCACTAGCTTGGATGAAAGAGGGTATGATGCTGTTGTGAGTTACAATTCTAGTTCAAACAATTTAACTGTCACCTTCACTGGATATCAAGACAACAGCATAGTCAAACAGAATTTGTTTTCTGTTGTCATTCTGAAAGATTACCTACCTGATTGGGTTGAATTTGGATTCACTTCAGCAACTGGGTTGTCTTTTGAGGAACATACTCTTAGATCATGGTCCTTCAACTCAAGTTTAGATTTTGAAGCACACAAGGATGGAAGCAAAACAGGACTTGTTATAGGGCTGAGTATTGGTGGTGCTTGTGTTTTGATTTTTGTTCTGGGGCTGGCTTGCTTGGTGAAATGGAAGCTGAAGAATAGAGACATGAAGGATGGTTTACATTTTGATCATGAAATGGATAATGATTTTGAAAGAAGCTCTCTACCTAAGAAGTTTACCTTTGAAGAACTTGCTGGAGCAACTAACAACTTTGCAAAGGACCACAAAATTGGAGAAGGAGGTTTTGGGGGAGTCTACAAGGGATTTTTAAGAGACATGAAAACTCGTGTTGCTATTAAGAAGGTTTCTAAGGGATCTAATCAAGGGGTGAAGGAGTATGCATCTGAAGTCAAAGTCATTAGTCAATTGAGGCATAAGAATTTGGTTCAACTCTTTGGTTGGTGTCACAAGCAGAATGATCTGCTACTGGTTTATGAGTTTGTGGAAAATGGAAGTTTAGATTCTTACCTGTTCAAAGGAAAAGGTTTGCTTACATGGACAGTGAGATATAACATTGTTAGAGGACTAGCTTCAGCATTATTATACCTACATGAAGAATGTGAGCAATGTGTGCTTCATAGAGACATAAAATCCAGCAATGTTATGTTAGACTCAAATTTTAATACAAAGCTTGGAGATTTTGGGTTGGCTAGACTAATGAACCATGAGATAGGATCAAAAACAACTGTTTTAGCTGGAACATATGGATATCTATCTCCTGAAGCTGCTACTAGAGGTAAAGCTAGTAGAGAATCTGATGTATATAGTTTTGGTGTTGTTGCTTTGGAAATAGCATGTGGTAGAAAAGCAATTGAACCAAATCTTAGTGAAGAAAACATCTACTTGGTGGATTGGGTTTGGGAACTCTATGGTAAAGGTGAACTCCTTAAAGCTTCTGATTCAAGATTATATGGAGAATACAATGAGAAGGAAGTAGAGAGGTTAATGATTGTTGGACTTTGGTGTACTCATATAGATTACCTTCAAAGGCCTGTGATTAGACAAGCTATTCAAGTGCTTAGTTTTGATGCTCCACTTCCCATTCTCCCATCAAAGATGGATACATCTACCTATAATACATCTTTCTATTCTGTGTCTTCTAAGATACCTGCTTTTGAAAATAGCCAAACTGGAACATCAACTTCTTCAAATAATAGCACTTTCACTGGGTCCTCACAATCAAGCACAACCTTTGAAGTCATTTCTCCATCAGCAGCACTTTTAAATACACATTAG 2055 0.3762 MAASYYSQKSHGVVFHVTIVSVLLLVTSRAAPLSFNYEQFSGDMTNAFNFSGDVYQEKQVLQLTKYEKDSLGRVIYSKLFHLWDINTSQVTDFTTSFSFTINTPNKTHRGDGITFFLASPNFPLPAPRDGSGIGLISRAQKDNPNFSKENHFVAVEFDTVVNDWDPTYDHVGIDVNAINTSYTTQWFTSLDERGYDAVVSYNSSSNNLTVTFTGYQDNSIVKQNLFSVVILKDYLPDWVEFGFTSATGLSFEEHTLRSWSFNSSLDFEAHKDGSKTGLVIGLSIGGACVLIFVLGLACLVKWKLKNRDMKDGLHFDHEMDNDFERSSLPKKFTFEELAGATNNFAKDHKIGEGGFGGVYKGFLRDMKTRVAIKKVSKGSNQGVKEYASEVKVISQLRHKNLVQLFGWCHKQNDLLLVYEFVENGSLDSYLFKGKGLLTWTVRYNIVRGLASALLYLHEECEQCVLHRDIKSSNVMLDSNFNTKLGDFGLARLMNHEIGSKTTVLAGTYGYLSPEAATRGKASRESDVYSFGVVALEIACGRKAIEPNLSEENIYLVDWVWELYGKGELLKASDSRLYGEYNEKEVERLMIVGLWCTHIDYLQRPVIRQAIQVLSFDAPLPILPSKMDTSTYNTSFYSVSSKIPAFENSQTGTSTSSNNSTFTGSSQSSTTFEVISPSAALLNTH 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01429 684 ProSiteProfiles Protein kinase domain profile. 344 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01429 684 Pfam Protein kinase domain 345 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01429 684 PANTHER - 17 682 - -
Car06g01429 684 PANTHER LECTIN RECEPTOR KINASE 17 682 - -
Car06g01429 684 SUPERFAMILY Protein kinase-like (PK-like) 328 638 IPR011009 -
Car06g01429 684 ProSitePatterns Protein kinases ATP-binding region signature. 350 374 IPR017441 GO:0005524
Car06g01429 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Car06g01429 684 Gene3D Transferase(Phosphotransferase) domain 1 421 635 - -
Car06g01429 684 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
Car06g01429 684 MobiDBLite consensus disorder prediction 648 667 - -
Car06g01429 684 SMART serkin_6 344 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01429 684 Pfam Legume lectin domain 33 272 IPR001220 GO:0030246
Car06g01429 684 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 265 IPR013320 -
Car06g01429 684 ProSitePatterns Legume lectins alpha-chain signature. 235 244 IPR000985 -
Car06g01429 684 ProSitePatterns Legume lectins beta-chain signature. 153 159 IPR019825 -
Car06g01429 684 Gene3D - 31 278 - -
Car06g01429 684 CDD lectin_legume_LecRK_Arcelin_ConA 33 265 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01429 Car-Chr6 13906209 13908455 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01429 23 632 Receptor kinase-like Gene Family AT5G10530 45.192 1.30e-171 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Car06g01429 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01429 - - cam:101491058 1337.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01429 06 13906209 13908455 Car06g01429 06 13906209 13908455 ECH