Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01426 ATGTTGCAGCTTTCTATTCAACGAGTGAAGAAGTTGAACTTTCTGAGACCTCAGATCTCTGCTTTGGGAAGTTCCCATTTCACAACAATGGCTGAACCATCATCTTCCAGTAAACGCAATGCCCCAAGGGTTCCAAATCTTATTGGGGGAAGGTTTCTTGACTCAAAAGCATCTAGTTTCATCGATGTTATAAACCCCGCAACACAAGAAGTTGTTTCACAAGTTCCATTGACTACAGATGAAGAGTTTAAAGCTGCTGTATCTGCAGCAAAGAAGGCATTTCCATTGTGGCGTAACACTCCAGTTACAACACGCCAACGTGTTATGTTGAAGCTCCAGGAGCTCATACGCAGAGATATGGATAAACTTGCTCTTAATGTGACCACCGAACAAGGAAAGACACTGAAGGATGCACAAGGAGATGTATTTCGTGGTTTAGAGGTGGTGGAACATGCTTGTGGGATGGCAACTCTACAAATGGGGGAGTATGTTTCGAATGTATCACACGGAGTCGACACATACAGCGTTAGAGAACCAATTGGTGTTTGTGCTGGTATTTGTCCTTTCAACTTTCCTGCAATGATTCCCTTGTGGATGTTCCCAATGGCTGTTACCTGTGGCAATACCTTTGTTTTAAAACCATCAGAGAAAGACCCAGGTGCTTCAATAATGCTCGCAGAATTGGCATTGGAGGCTGGTTTGCCAGAGGGTGTCTTAAATGTTGTTCACGGAACCCATGATATTGTGAATGCCATTTGTGATGATGACGATATCAAAGCCATATCATTTGTTGGTTCTAATGTTGCTGGAATGCACATATATTCAAGAGCAGCAGCTAAAGGGAAGCGTGTTCAGTCTAATATGGGAGCTAAAAATCATGCAATTGTCATGCCGGATGCGAATGTCGATGCTACTGTAAATGCTTTAATTGCTGCTGGTTTTGGAGCTGCTGGACAAAGATGCATGGCTCTCAGCACAGTTGTTTTTGTTGGAGGCTCACAACCATGGGAATCTAAAATCCTAGAGAGTGCCAAAGCTCTAAAAGTAAATGCTGGAACTGAACCTGATGCAGATCTTGGTCCGGTCATCAGCAAACAGGCAAAGGAGCGGGTGCACACATTAGTTCAATCCGGCGTCGAAAGTGGTGCCAAACTACTGCTTGATGGAAGAAATATAGTGGTCCCAGGATATGAATCTGGCAATTTTGTTGGCCCTACCATCTTATCAAATATCACTGCCGACATGGAGTGCTACAAGGAGGAAATTTTTGGCCCAGTTCTTCTTTTCATGGAGGCTGATAGTTTGGAAGAGGCCATAAATATTATCAACAAAAACAAGTATGGAAATGGTGCTTCTATATTTACTACTTCTGGTGTTGCTGCAAGGAAATTTCAGACTGAGATCGAGGCCGGACAGGTTGGCATCAACGTTCCCATTCCAGTTCCCTTGCCATTTTTTTCATTTACTGGCAACAAGGCGTCATTTGCTGGCGATCTCAATTTCTATGGCAAAGCAGGGGTTAACTTTTATACACAGATCAAAACAATAACTCAGCAGTGGAAGGAAGCAGTTGGCGGTAGCAAGGTTAACATGGCAATGCCAACCTCTCAAAAATCTTGA 1620 0.434 MLQLSIQRVKKLNFLRPQISALGSSHFTTMAEPSSSSKRNAPRVPNLIGGRFLDSKASSFIDVINPATQEVVSQVPLTTDEEFKAAVSAAKKAFPLWRNTPVTTRQRVMLKLQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSHGVDTYSVREPIGVCAGICPFNFPAMIPLWMFPMAVTCGNTFVLKPSEKDPGASIMLAELALEAGLPEGVLNVVHGTHDIVNAICDDDDIKAISFVGSNVAGMHIYSRAAAKGKRVQSNMGAKNHAIVMPDANVDATVNALIAAGFGAAGQRCMALSTVVFVGGSQPWESKILESAKALKVNAGTEPDADLGPVISKQAKERVHTLVQSGVESGAKLLLDGRNIVVPGYESGNFVGPTILSNITADMECYKEEIFGPVLLFMEADSLEEAINIINKNKYGNGASIFTTSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTITQQWKEAVGGSKVNMAMPTSQKS 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01426 539 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 30 539 IPR010061 GO:0004491
Car06g01426 539 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 46 520 IPR010061 GO:0004491
Car06g01426 539 CDD ALDH_F6_MMSDH 44 520 IPR010061 GO:0004491
Car06g01426 539 SUPERFAMILY ALDH-like 41 521 IPR016161 GO:0016491
Car06g01426 539 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 314 325 IPR016160 GO:0016491
Car06g01426 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 63 497 IPR016162 GO:0016491
Car06g01426 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 289 489 IPR016163 GO:0016620
Car06g01426 539 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 30 539 - -
Car06g01426 539 Pfam Aldehyde dehydrogenase family 54 516 IPR015590 GO:0016491
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01426 12 504 Aldehyde Dehydrogenase Gene Family AT2G14170 80.325 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01426 K00140 - gmx:100791508 969.918