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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Car06g01420
ATGGATACGCTGAATTCGTGTGAAAACGAGTTAATGGTTGTTCCCATGCACTGTACCAATGGAGCTTCTGTTTCTGATGAAGGGGGAGAAGAATCTCAACCCATTGCTACTACTTCTCGTGCTAGTGAACTCACCATTTCATTTGAAGGCGAAGTCTATGTTTTCCCTTCCGTTACGCCACAAAAGGTGCAGGCTGTATTGCTACTCTTGGGAAGGCAGGAGACACCTGATAGCACTCCCACCTCTAACTTTTTGGTGCAGCAAAACTGTCAAGATATTTGGGGAATAAATGATCCTTCTCGTAGTTCAAAGCTCTCGCGGAGAATTGCATCACTTGTTAGGTTCCGTGAAAAGCGAAAGGAGAGATGCTTTGAGAAGAAAATTCGGTACACTTGCCGTAAAGAGGTTGCTCAAAGGATGCATCGGAAGAATGGACAGTTTGCATCATTGAAAGAAGACTACATTTCGCCTGCTGAAAATCAGGATTCTAGCAATGGTACTCCTTGCCCAGAATCTACTGAACGTAGATGCCAACATTGTGGAATTGGTGAGAAGTCTACTCCAGCAATGCGTCGAGGACCAGCTGGTCCGAGATCTCTGTGCAATGCCTGTGGTCTCATGTGGGCAAATAAGGGAACTTTGAGAGATCTCAGCAAAGCAGGAAGGATTGCTTTTGAACAAAATGAACTGGATACTTCTACTGATATAAAGCCTTCTACAACAGAACCAGGAAATTCTTGCACTGTGCAGGACAAGGAGGGAAGCCCCCAGGAAAATAAGCCTGTACCAATAGACGTCAAACAGTCACCTGAGACGGAAAATGAGCAGTATATTCTTGAATCTGCTGAAGCAGTTACCGACAACCTGTCCATCCAATTGGAGAATAATGTTCTTGATCTGCACGAGCAGGATAATACTATGGAGGATTTTGCTGATGCTTCTGGGACTGAATTTGAGATTCCTGCAGGTTTCGACGATCAGGTTGATATTGATGATTCTAATATGAGGACTTACTGGCTGTGA
1023
0.4438
MDTLNSCENELMVVPMHCTNGASVSDEGGEESQPIATTSRASELTISFEGEVYVFPSVTPQKVQAVLLLLGRQETPDSTPTSNFLVQQNCQDIWGINDPSRSSKLSRRIASLVRFREKRKERCFEKKIRYTCRKEVAQRMHRKNGQFASLKEDYISPAENQDSSNGTPCPESTERRCQHCGIGEKSTPAMRRGPAGPRSLCNACGLMWANKGTLRDLSKAGRIAFEQNELDTSTDIKPSTTEPGNSCTVQDKEGSPQENKPVPIDVKQSPETENEQYILESAEAVTDNLSIQLENNVLDLHEQDNTMEDFADASGTEFEIPAGFDDQVDIDDSNMRTYWL
340
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Car06g01420
340
MobiDBLite
consensus disorder prediction
155
175
-
-
Car06g01420
340
ProSiteProfiles
GATA-type zinc finger domain profile.
171
228
IPR000679
GO:0006355|GO:0043565
Car06g01420
340
PANTHER
GATA TRANSCRIPTION FACTOR 28
21
331
IPR045280
GO:0006355
Car06g01420
340
MobiDBLite
consensus disorder prediction
156
172
-
-
Car06g01420
340
ProSitePatterns
GATA-type zinc finger domain.
177
204
IPR000679
GO:0006355|GO:0043565
Car06g01420
340
SMART
GATA_3
171
224
IPR000679
GO:0006355|GO:0043565
Car06g01420
340
Pfam
GATA zinc finger
177
213
IPR000679
GO:0006355|GO:0043565
Car06g01420
340
ProSiteProfiles
Tify domain profile.
37
72
IPR010399
-
Car06g01420
340
Pfam
tify domain
40
71
IPR010399
-
Car06g01420
340
SUPERFAMILY
Glucocorticoid receptor-like (DNA-binding domain)
173
225
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Car06g01420
Car-Chr6
13811006
13815650
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Car06g01420
14
220
Tify Gene Family
AT1G51600
55.046
2.45e-64
204
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
C2C2-GATA
Car06g01420
CCT
5.1e-14
CL0281
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Car06g01420
-
-
gmx:100785549
509.605
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