Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01409 ATGGAGGGTGGAAACAGAGCCGAAGCTGAACGCTGGCTTTACACTGCTAACAAACTACTTAGCGCACGTGACTTGCATGGTGCACGCTCCTTCGCTATCCGTGCTCGTGAATCCGACCCTACCTTCGACGCCTCTGAGCTTCTCCTTGCTGTCACCGACACTCTCCTCGCCGGAGAAGCAAGGATTACCGACCACCACCGTGACTGGTACGGAATACTCCAAAGCATTCGCTACACTACCAACATCGAACATATCGCTAATCAGTACCGCCGTCTAGCTTTTCTCCTTGACCCAAATTGGAACCCCTTCGCCTACTCCGGCCACGCCTTTTCACTTATTCATGATGCTTGGTCCGTTCTATCCAACTCTGCCAAGAAGGCCATGTACGATAGCGACCTACGGTTGCTCACTTCCCCGCCGGCGCCGGCGCTTCTTCCGCCACCGCCATTGTTGGCTCATCCTCAGCCTATTCCTCTACCGGCGCCACAGCATCCTCCTCTTCCGCCATTGGTGGCTCAACATCTACAGTATCCTCCTCCTAACCCAACGCCGAGGAAAAACCCAAGACAGAAAGACGGCGCGACAGAGGCGACTCGGCAAAATCAAAACCCTAGCGAGCCAGCCGAGTCGACTCAGCAGACACCAACGGCGAGTGCTACTGAAACGGAAGGTAACGTTAGCTTCTGGACTTTATGCCCTTACTGTTACGTTTATTATGAGTATCCGAAGAGGTACGAAGAGTGTGCCCTGCGGTGCCAGAGTTGTCGGAGGGCGTTTCATGCAGTGGTGGTACGTTCACCGCCGTTGAACGAGATAGATTCTTCGTTTTGTACTTGGGGATTTTTCCCGTTAGGGTTTTCAGGCGATTCGAAAGATGTGAACGGGACTTCTTCAAATTGGAACCCGATATGCCCTCTATTTCCATGCGCTTCGAAATCCAATAAGAAAAAGAGTTGGGTTTACTATGATGAAGAGGCTGCTGCGGCGTTTATCGATATCTCTGATCCCAGTGATGATGATTCCGATGATTCTGATTGGAGGGGTGATAGTGGTGTGATGAGAGGGGTGAAGAGGTCAAGGGCTAATGGTAGAAGGGTAGGTGGAGAGAGACCTAGGAGAAGTGCTACTGCTGCGGCAgggaatggtaatgggaatgggaatgggaatgggaatgggaatgagaatgAGAACAATGTTGGGGCTGTTGATGCTGCTGGTGGTGTAGAGCCCGATTCTACTAAGAAACTTGTGCCCGTTAATTCGAGGAGGAAGGGTGATGGGAACTTGGGGAAGTTGGATTTGAATGTGGAGTTCAGTAATGAGGCGGAGGAGCCTTTCCGGGGAGTGCGTGACCATGAAGGGAATGTGACCGGCAATGCTGAGGATAATATTGAAGGGATTGGGTTTTTTGAGGGTCTTGATGAGTTCCTCAGTAGCTTACCCATTCTCAATGTGGTAGGAGATGATAAGGGCGTGTTCTAA 1482 0.4973 MEGGNRAEAERWLYTANKLLSARDLHGARSFAIRARESDPTFDASELLLAVTDTLLAGEARITDHHRDWYGILQSIRYTTNIEHIANQYRRLAFLLDPNWNPFAYSGHAFSLIHDAWSVLSNSAKKAMYDSDLRLLTSPPAPALLPPPPLLAHPQPIPLPAPQHPPLPPLVAQHLQYPPPNPTPRKNPRQKDGATEATRQNQNPSEPAESTQQTPTASATETEGNVSFWTLCPYCYVYYEYPKRYEECALRCQSCRRAFHAVVVRSPPLNEIDSSFCTWGFFPLGFSGDSKDVNGTSSNWNPICPLFPCASKSNKKKSWVYYDEEAAAAFIDISDPSDDDSDDSDWRGDSGVMRGVKRSRANGRRVGGERPRRSATAAAGNGNGNGNGNGNGNENENNVGAVDAAGGVEPDSTKKLVPVNSRRKGDGNLGKLDLNVEFSNEAEEPFRGVRDHEGNVTGNAEDNIEGIGFFEGLDEFLSSLPILNVVGDDKGVF 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01409 493 MobiDBLite consensus disorder prediction 154 186 - -
Car06g01409 493 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 490 - -
Car06g01409 493 MobiDBLite consensus disorder prediction 194 220 - -
Car06g01409 493 Pfam DnaJ domain 68 130 IPR001623 -
Car06g01409 493 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Car06g01409 493 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Car06g01409 493 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 490 - -
Car06g01409 493 CDD DnaJ 68 122 IPR001623 -
Car06g01409 493 SUPERFAMILY Chaperone J-domain 63 133 IPR036869 -
Car06g01409 493 MobiDBLite consensus disorder prediction 333 424 - -
Car06g01409 493 Gene3D DnaJ domain 62 137 IPR036869 -
Car06g01409 493 MobiDBLite consensus disorder prediction 378 398 - -
Car06g01409 493 MobiDBLite consensus disorder prediction 154 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01409 Car-Chr6 13727755 13729391 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01409 8 490 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 39.122 4.71e-93 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01409 - - cam:101509006 854.358