Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01407 ATGGAAGGTGGGAATAGAGCCGAAGCTGAGCGGTGGCTTTACACCGCCAACAAGCTTCTAAGCGCACGTGACCTGCACGGTGCTCGCTCCTTCGCAATCCGTGCCCGCGAATCTGACCCTACTTTCGACGCCTCCGAGCTTCTCCTTGCTGTCATCGACACTCTCCTTGCCGGTGAATCGCGGATCAACGACCACCACCGCGATTGGTACGGAATCCTCCAAATCCTCCGTTACACCACCAACATCGATCACATCGCTAATCAATACCGTCGTCTCGCACTCCTTCTTGACCCTAACCGGAACCCCTTCGCCTTCTCCGGCCATGCCTTTTCTCTTGTCCATGATGCTTGGTCTGTTCTCTCCAACACTGCCAAGAAGGCTTTGTACGATAGCGACTTACGATTGCTCACTTCCCCGCCGGCTCCTccgcagcatcagcctccgccacaacctgtgcctcagcatcagcAGTATCCGCCTCCTAACCTGACGCCGAAGAAAAACCCGAGATCTAAAGACGCCGCGACAGAGCCGACTAGGCAGAATCGAAACCCTAACGAATCCACTGAGTCGACTCGGCAGACTCGGACAGCGAGTGCTGCTGAAACGGAAGGTAGCATTAGCTTCTGGACCTTGTGTCCTTACTGTTACGTTTATTATGAGTATCCGAAGGGTTACGAAGAGTGTGCCCTGCGGTGCCAGAGTTGTCGGAGGGGGTTTCATGCGGTGGTGATACGTTCACCACCTTTGAACGAGATTGATTCTTCGTTTTGTACATGGGGTTTTTTCCCTTTAGGGTTTTCAGGGGATTTGAAAGATGTTAATGGGGCTTCTTCTAATTGGAACCCGTTATGCCCTCTATTTCCATTCCCTTCGAAATCGTCCAATAAGAAAAAGAGTTGGGTTTACTACGATGAAGAGGCTGCTGCGGCGTTTATCGATATTTCTGATCCTAGTGATGATGATTCTGATGATGGGGATTGGAGGCATGGTAGTGGTAGTGGTAAGAATAAAGGGGTCAAGAGGTCAAGAGTTAGTGGTAAAAAGTATAGGAAAGATTCTGCTAATGCTAGTGGTAGTGCTAGGAGGGAAGCTGGGGAGAGACCTAGGAGGAATGCTACTGGTGCTGCAGGGAATGGGAATGGGAATGAGAATGAGAACAGTGTTGGGGCTGTTGATGCTGCTGCTAGTGGTGTAAAGCTAGATTCTAGTAAGAAAGCTGTACCGGGTAGTTCAAGAAGGAGGGGTGCTGGAAACTTGGGGAAGTTGGATTTGAATGTGGAGTTCAGTAATGAGGTGGAGGAGCCTTCCCGTGGAGTGCGTGCCCGTGAAGGGAATGCAACTGGCAATGCTGAGGATAATATTGAAGGGATTGGGTTTTTTGAGGGTCTTGATGAGTTCCTCAGTAGCTTACCCATTCTCAATGTTGTGGGAGATGATAAGGTTAAAGGTCAATAG 1458 0.4842 MEGGNRAEAERWLYTANKLLSARDLHGARSFAIRARESDPTFDASELLLAVIDTLLAGESRINDHHRDWYGILQILRYTTNIDHIANQYRRLALLLDPNRNPFAFSGHAFSLVHDAWSVLSNTAKKALYDSDLRLLTSPPAPPQHQPPPQPVPQHQQYPPPNLTPKKNPRSKDAATEPTRQNRNPNESTESTRQTRTASAAETEGSISFWTLCPYCYVYYEYPKGYEECALRCQSCRRGFHAVVIRSPPLNEIDSSFCTWGFFPLGFSGDLKDVNGASSNWNPLCPLFPFPSKSSNKKKSWVYYDEEAAAAFIDISDPSDDDSDDGDWRHGSGSGKNKGVKRSRVSGKKYRKDSANASGSARREAGERPRRNATGAAGNGNGNENENSVGAVDAAASGVKLDSSKKAVPGSSRRRGAGNLGKLDLNVEFSNEVEEPSRGVRAREGNATGNAEDNIEGIGFFEGLDEFLSSLPILNVVGDDKVKGQ 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01407 485 MobiDBLite consensus disorder prediction 178 200 - -
Car06g01407 485 SUPERFAMILY Chaperone J-domain 64 133 IPR036869 -
Car06g01407 485 MobiDBLite consensus disorder prediction 400 454 - -
Car06g01407 485 SMART dnaj_3 67 125 IPR001623 -
Car06g01407 485 MobiDBLite consensus disorder prediction 349 370 - -
Car06g01407 485 MobiDBLite consensus disorder prediction 140 166 - -
Car06g01407 485 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 484 - -
Car06g01407 485 MobiDBLite consensus disorder prediction 315 388 - -
Car06g01407 485 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Car06g01407 485 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Car06g01407 485 CDD DnaJ 68 122 IPR001623 -
Car06g01407 485 Gene3D DnaJ domain 56 138 IPR036869 -
Car06g01407 485 Pfam DnaJ domain 68 130 IPR001623 -
Car06g01407 485 MobiDBLite consensus disorder prediction 134 200 - -
Car06g01407 485 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01407 Car-Chr6 13720630 13724040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01407 8 484 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 40.681 2.92e-100 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01407 - - cam:101509006 866.685