Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01392 ATGAGTGAAAAAGTTGAGGGAAGCTTAACAGTGACATGGGAGAATCTGAAAGTCACTGTTCCAGATGGAAACAAAAGGAAACCAATTCTTCAGGATCTTACAGGTTATGCTCAACCTGGAAGGCTTTTGGCTATAATGGGCCCTTCTGGCTCTGGAAAATCCACACTTCTTGATGCTTTAGCAGGGAGATTAAGCTCAAACACAAAGCGAACAGGGGAAATTCTGATCAATGGTCACAAACAAGAACTTGCTTATGGAACCTCGGCTTATGTGACTCGGGATGATACCTTATTAACAACCTTAACTGTTAGAGAAGCAGTGTACTATTCAGCTCAACTCCAATTACCTGACACTATGTCTAAGGAAGAGAAGAAAGAAAGAGCTGAGTTTACAATAAAAGAAATGGGTTTGCAAGATGCAATTAACACAAGAATTGGAGGGTGGGGTGTTAAAGGAATAAGTGGGGGTCAAAAAAGGAGAGTGAGCATTTGCATTGAGATTCTAACACGTCCTAGACTTCTGTTTCTTGATGAACCAACAAGTGGACTTGATAGTGCAGCTTCTTATTATGTTATGAAAAGAATTGCATCATTAGACAAAAAAGATGGCATTCAAAGGACTATTGTTGCCTCAATCCATCAACCTAGTACTGAAGTTTTCCAACTTTTCCATAATCTTTGTCTTTTGTCTTCAGGTAAAACAGTTTACTTTGGACCTGCTTCTGCTGCATCTGAGTTTTTTGCTTCTAATGGATTTCCTTGTCCTCCTCTTCAAAATCCATCTGACCATTTACTTAAAACTATAAACAAGGACTTTGATCAGGATGTTGAGACTGCTGTATTGGAAGGGAGTGGAACAATGTCCACAGAAGAAGCAATTTGTATCCTTGTGAACTCTTATAAATCATCTGAAAGGAACAAAGATGTTCATAATGAAGTAGAAGTACTATCCGAAAAGCATACTAGCTCAATGGAAAACAAGAAAGGGCATGCAGACTTCCTTAATCAATGCTTAGTGCTTACAAAAAGGTCATCAGTGAACATGTTTCGTGATCTAGGCTATTATTGGTTACGCTTCATCATATATGTTTCATTGGCTATAAGTTTAGGCACTGTTTTCTATGATTTGGGAACAAGTTATAGGTCAATTAAGGGTCGAGGTTCACTTCTTTCATTTGTGGCTGGATTCTTAACTTTCATGAGCATAGGTGGATTTCCTTCATTTGTGGAAGAGATGAAGGTAGTATTTCAAAGAGAAAGAGAAAATGGGCATTATGGTGTAATTGCATTTGTGATTGGGAACATTTCTTCAtgttgggaaaaacagcataaTCTAATGTTAGTTGAAAGTCTTATGATGATAATTGCAAGCATTGTCCCTAACTATCTAATGCTAATCATAACCGGTGCTGGAATTCAAGGAATTTTTATTTTGATTGGTGGGTTCTTTAAATTGCCACATGAAATTCCTAAGCCATTTTGGAGATACCCTTTACACTATGTTGCTTTTCATACATATGTTTTTGAAGGGTTGTTCAAGAATGAGTATGAAGGACTAATATTTGCTATTAAAAATGGAAAGGGTACTACTACACATTACATTACTGGTGAATAA 1614 0.3674 MSEKVEGSLTVTWENLKVTVPDGNKRKPILQDLTGYAQPGRLLAIMGPSGSGKSTLLDALAGRLSSNTKRTGEILINGHKQELAYGTSAYVTRDDTLLTTLTVREAVYYSAQLQLPDTMSKEEKKERAEFTIKEMGLQDAINTRIGGWGVKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMKRIASLDKKDGIQRTIVASIHQPSTEVFQLFHNLCLLSSGKTVYFGPASAASEFFASNGFPCPPLQNPSDHLLKTINKDFDQDVETAVLEGSGTMSTEEAICILVNSYKSSERNKDVHNEVEVLSEKHTSSMENKKGHADFLNQCLVLTKRSSVNMFRDLGYYWLRFIIYVSLAISLGTVFYDLGTSYRSIKGRGSLLSFVAGFLTFMSIGGFPSFVEEMKVVFQRERENGHYGVIAFVIGNISSCWEKQHNLMLVESLMMIIASIVPNYLMLIITGAGIQGIFILIGGFFKLPHEIPKPFWRYPLHYVAFHTYVFEGLFKNEYEGLIFAIKNGKGTTTHYITGE 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01392 537 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 245 IPR027417 -
Car06g01392 537 CDD ABCG_EPDR 8 238 - -
Car06g01392 537 Pfam ABC-2 type transporter 446 516 IPR013525 GO:0016020|GO:0140359
Car06g01392 537 Pfam ABC-2 type transporter 336 435 IPR013525 GO:0016020|GO:0140359
Car06g01392 537 Pfam ABC-2 type transporter 213 315 IPR043926 GO:0140359
Car06g01392 537 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 256 IPR003439 GO:0005524
Car06g01392 537 SMART AAA_5 39 228 IPR003593 -
Car06g01392 537 Pfam ABC transporter 30 181 IPR003439 GO:0005524
Car06g01392 537 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 5 437 - -
Car06g01392 537 ProSitePatterns ABC transporters family signature. 153 167 IPR017871 GO:0005524
Car06g01392 537 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 443 537 - -
Car06g01392 537 Gene3D - 2 251 IPR027417 -
Car06g01392 537 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 5 437 - -
Car06g01392 537 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 443 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01392 Car-Chr6 13607447 13634757 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01392 29 241 Calmodulin-binding Proteins AT2G36910 27.523 3.86e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01392 K05681 - gmx:100794527 755.362