Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01391 ATGTTTACCATGGGTTCCCCTAGTGTCCTAGAGATTGAAGGCACTAGAGAGGAGGTGGAAACATCAAGCAGAAGGATGAATGGAGGAGAGAAAGAGAGAGGAATTTGCTTGACTTGGAAGGATTTATGGGTGACTGTTTCTGTTTCCACAGGAAAGATCAAAGAAAGCAAATCAATTCTTGAGGGTCTAAATGGTTATGCAAAACCAGGGCAACTTTTGGCCATAATGGGTCCTTCTGGTTGTGGAAAATCTACACTTCTTGATTCTTTAGCAGGTAGATTAGGATCAAACACAAGACAATCTGGGGAGATTCTTATCAATGGCAATAAACAAGCATTGGCTTATGGAACCTCGGCATATGTAACACAAGATGATACTTTATTGAAAACCTTAACTGTTAAAGAAGCAGTGTACTATTCAGCTCAACTTCAGTTACCTGACTCAATGTCTAAAGAAGAGAAGAAACAAAGAGCTGATTTTACAATCAAAGAAATGGGTCTACAAGATGCAATTAACACAAGAATTGGAGGGTGGGGTGTTAAAGGAATAAGTGGGGGTCAAAAAAGGAGAGTGAGCATTTGCATTGAGATTCTAACACGTCCTAGACTTCTGTTTCTTGATGAACCAACAAGTGGACTTGATAGTGCAGCTTCTTATTATGTTATGAAAAGAATTGCATCATTAGACAAAAAAGATGGCATTCAAAGGACTATTGTTGCCTCAATCCATCAACCTAGTACTGAGGTTTTCCAACTTTTCCATAATCTTTGTCTTTTGTCTTCAGGTAAAACAGTTTACTTTGGACCTGCTTCTGCTGCATGTAAGTTTTTTGCTTCAAATGGTTTTCCTTGTCCTCCCCTTCAAAATCCATCTGATCATTTACTTAAAACAATAAACAAGGATTTTGATGAGGATATTGAGATTGCTTTAGCAGAGATGAATGGAACAATTTCCACAGAACAAGCAATAAATATCCTTGTAAGCTCATATACATCATCTGAAAGAAACCAACAAGTTAAAGATGAAGTAGCAATACTATCTAAAAAGGACAACAATTCAACATACAAGAGGGAAAAACATGCTGGCTTCCTTAATCAATGTTTAGTTCTAACCAGAAGATCTTTTGTGAACATGTTTCGTGATCTAGGATATTATTGGTTACGCCTTGGCATATATGTTGCATTGGCTACAAGTTTAGCCACTGTCTTCTATGATTTGGGTACAAGTTATGGCTCAATTCAGGATAGAGGTTCATTTCTTATGTTTGTGTCTTCATTCCTTACTTTCATGACCATTGGTGGATTCCCTTCTTATGTGGAGGACATGAAGGTATTTGAACGTGAAAGACTAAATGGACATTATGGTGTTACTGCATATGTAATTGGGAACACCTTTTCAAGTATTCCATACTTGGTGGTAGTTTCAGTGATTCCTGGTGCTATAGCTTATTACCCTCCTGGTCTTCAAAAAGGCTATGATCATTTTCTTTATTTTATTTGTAACCTATTTGCTTGTCTAATGTTAGTAGAAAGTCTTATGATGATAGTTGCAAGCATTGTTCCTGATTTTCTTATGGGAATTATAACTGGTGCTGGAATTCAAGGAATTATGATGTTGGCTGGTGGGTTCTTTAGATTACCAATTGATCTTCCAAAGCCATTTTGGACATACCCTATGTTTTATATTGCATTTCATAGGTATGCTTTTCAAGGAATGTATAAAAATGAGTTTCAAGGACTCAAATTTGATAGAGATGGTGATGCTGCTGGATCACTCAATTACATTAGTGGTGAACAGATTCTAAGAAATAAATGGCATGTTGACATGAGTTACTCAAAGTGGGTTGATTTTGGAATTTTGTTGGGTATGATTGTTTTGTATAGACTTTTATTTTTTATTATTATCAAAACTACTGAGAAGCTAAAACCTATTGTTTTATCACTCATGTCAGTCTCTCCTAAGCAAACAATACAAGTTTTGGAGAATCCTAATGCCACTCCTTTACATGTAGAACTTGTATAA 2022 0.362 MFTMGSPSVLEIEGTREEVETSSRRMNGGEKERGICLTWKDLWVTVSVSTGKIKESKSILEGLNGYAKPGQLLAIMGPSGCGKSTLLDSLAGRLGSNTRQSGEILINGNKQALAYGTSAYVTQDDTLLKTLTVKEAVYYSAQLQLPDSMSKEEKKQRADFTIKEMGLQDAINTRIGGWGVKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMKRIASLDKKDGIQRTIVASIHQPSTEVFQLFHNLCLLSSGKTVYFGPASAACKFFASNGFPCPPLQNPSDHLLKTINKDFDEDIEIALAEMNGTISTEQAINILVSSYTSSERNQQVKDEVAILSKKDNNSTYKREKHAGFLNQCLVLTRRSFVNMFRDLGYYWLRLGIYVALATSLATVFYDLGTSYGSIQDRGSFLMFVSSFLTFMTIGGFPSYVEDMKVFERERLNGHYGVTAYVIGNTFSSIPYLVVVSVIPGAIAYYPPGLQKGYDHFLYFICNLFACLMLVESLMMIVASIVPDFLMGIITGAGIQGIMMLAGGFFRLPIDLPKPFWTYPMFYIAFHRYAFQGMYKNEFQGLKFDRDGDAAGSLNYISGEQILRNKWHVDMSYSKWVDFGILLGMIVLYRLLFFIIIKTTEKLKPIVLSLMSVSPKQTIQVLENPNATPLHVELV 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01391 673 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 286 IPR003439 GO:0005524
Car06g01391 673 MobiDBLite consensus disorder prediction 13 27 - -
Car06g01391 673 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524
Car06g01391 673 Gene3D - 41 278 IPR027417 -
Car06g01391 673 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 276 IPR027417 -
Car06g01391 673 Pfam ABC-2 type transporter 243 300 IPR043926 GO:0140359
Car06g01391 673 Pfam ABC transporter 61 211 IPR003439 GO:0005524
Car06g01391 673 MobiDBLite consensus disorder prediction 1 27 - -
Car06g01391 673 SMART AAA_5 69 258 IPR003593 -
Car06g01391 673 Pfam ABC-2 type transporter 366 577 IPR013525 GO:0016020|GO:0140359
Car06g01391 673 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 7 669 - -
Car06g01391 673 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 7 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01391 Car-Chr6 13603185 13608162 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01391 59 275 Calmodulin-binding Proteins AT2G36910 29.596 8.19e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01391 K05681 - gmx:100813462 1011.91