Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01384 ATGGATAGTTTCTGTTGCTTCAGTTCTGTCAGTCAGGTGGTTGGAGGGCGATCTTCTTGCAACTCTGGCAAAGGCAAGAGCAGTCAATCATCGGTTAAATATGGCTTTAGCCTTGTTAAAGGGAAAGCCAACCATCCAATGGAGGATTATCATGTAGCAAAATTTGTTGCTTTCAAAGGACAAGAATTAGGTCTTTTCGCTATATACGATGGACACCTAGGAGACAGCGTGCCATCATATTTGCAAAAGAATCTCTTTTCTAATATCTTGAAGGAAGAGGACTTCTGCGACGATCCATTCATGTCCATTTCTAGAGCTTATGTGTCGACAGATCAGGCAATTCTTACTCACAGTCCTGATTTGGGGCGAGGAGGATCAACTGCTGTAACTGCAATTCTCATAAATAATCAGAAATTATGGGTCGCCAATGTTGGAGATTCACGAGCAGTACTGTCAAGGGGAGGGGAAGCTTTACAGATGACTACTGATCATGAACCTAATACGGAACGGGGCAGCATTGAGAATAAAGGCGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGAGTGAATGGTCAGCTTGCGGTTTCTCGAGCATTTGGAGACAAAAACCTGAAAACACACTTGCGATCTGATCCTGATATTCAGTATGCTGATGTTGACTCAGATGTTGAGCTTTTGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGCGAATCAAGAAGCTGTTGATATTGCAAAAAGGATAAAGGATCCGCAAAAGGCGGCTAAACAACTAGCTACTGAGGCATTGAACAGAGACAGTAAGGATGATATTTCTTGCATTGTAGTTCGTTTCAAGTGA 846 0.4267 MDSFCCFSSVSQVVGGRSSCNSGKGKSSQSSVKYGFSLVKGKANHPMEDYHVAKFVAFKGQELGLFAIYDGHLGDSVPSYLQKNLFSNILKEEDFCDDPFMSISRAYVSTDQAILTHSPDLGRGGSTAVTAILINNQKLWVANVGDSRAVLSRGGEALQMTTDHEPNTERGSIENKGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIQYADVDSDVELLILASDGLWKVMANQEAVDIAKRIKDPQKAAKQLATEALNRDSKDDISCIVVRFK 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01384 281 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Car06g01384 281 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 280 - -
Car06g01384 281 Gene3D - 17 281 IPR036457 -
Car06g01384 281 SUPERFAMILY PP2C-like 28 281 IPR036457 -
Car06g01384 281 SMART PP2C_SIG_2 44 280 IPR001932 -
Car06g01384 281 CDD PP2Cc 32 280 IPR001932 -
Car06g01384 281 SMART PP2C_4 29 278 IPR001932 -
Car06g01384 281 PANTHER PROTEIN PHOSPHATASE 2C 1 280 IPR015655 GO:0004722|GO:0006470
Car06g01384 281 Pfam Protein phosphatase 2C 42 273 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01384 Car-Chr6 13536550 13542414 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01384 1 281 PP2C-type Phosphatase Gene Family AT1G22280 71.429 6.98e-149 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01384 K17506 - gmx:100801722 482.641