Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01382 ATGGCGGACCGTGGTGCTTCTTCTTACGGATTGACTCCTCGACTAGATATTCAGCAGTTACAATTTGAAGCCCAGCATCGATGGTTGCGCCCTGCAGAAATATGCGAAATTCTTAAGAATTATCAGATGTTTCAAATCACTCCAGAACCGCCTAGCAGGCCACCGAGTGGATCGCTTTTTCTTTTTGATCGCAAGGTTTTGAGGTACTTCAGAAAGGATGGACACAACTGGAGAAAGAAGAAAGATGGAAAAACTGTGAGGGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTGTTACACTGCTACTATGCCCATGGAGAAGAGAACGAAAATTTTCAGAGGCGAAGCTATTGGATGCTTGAACCGGATATGATGCATATAGTGTTTGTCCACTACTTGGATGTGAAGGTTAACAAGACCAATATTGGTGCAAGTACAGATACTAATGAGGTTACATCAGATTCCCAGAACGGCAGTTCTGTGTCATCTGGCTTTCCTGCAAATTACGGTAACACGCCTTCAGGAAGTACGGATTCTATGAGCCCAACAAGTACTTTAACTTCTTTATGTGAAGATGCTGATTCAGAGGATATTCACCAAACAAGCTCAGGATTTCATGCTTTTCATGGGTCACAAAATCTGGGGAATGGTCCACCCATGGATAAGATTGATGCTCGTTCAAATAGTTCATATCTTACGCATCCCCTTTCAGGTGGTCATGGCCAGTTACCAATTTCAGGAACAAATTATCTCCCACTTGTTCAGGGGGTTAAATCCAATCCAAGTGATATTACATACATTGAGGGTCAGAGACACATCATAGCATCCTGGGACAATGTCGTGGAGAAATCTGCAGGATCACACTCTGATCCTTCCCTTGTATCAACAAATTCCATTCCATCAAGTTCAATGGAAAACACCATTGAACAAGAACAGACTGTCTTTACTGAAGTAGGAGGGGCCTCACAATCTCTCCAATCAAATTGGCAGATTCCTTTTGAGGAGAATACAGGAGAATTTCCTAAATGGAGTTTTACTCAATCATCGAGTTTGGAATTTGGATCTGATTATACCACTGGATTACTGGGAAAAGAAAATTATAATGGAAGTCCAGAAACTGATCCTGGCCTATTTTCTTTTAATTATGAGCCAGAAGAGCAGTCTGTGCAGCAAAACTTGTCAATGCAGCATGCACATGGACAATCTCAGGATGCACTGACAACTGAGTGTGATGAAATTCATGGTGAACAGAGTATCAACTATGCATTGACCATGAAGCGTGTTTTTATGGATGCAGAAGAAAGCCTAAAGAAGGTTGATAGCTTTTCTAGGTGGATTTCTAAAGAACTTGCAGCGGTGGACGATCTACACATGCAGTCTTCCCCTGGTGTTTCCTGGGGAACGGATGAATGTGGGAATGTGATAGATGAAACCTCATTGAACCTGTCCCTATCTCAAGACCAGTTGTTCAGCATAAATGATTTTTCACCTAAATGGGCTTATGCTGAATCAGAAATTGAGGTGTTGATTATTGGAACATTTTTGAAAAGTCAACCAGAGATGGCAACATGTAACTGGTCCTGTATGTTTGGGGAAGTGGAAGTTCCAGCTACGGTTTTAGCTAATGGAATTCTGTGCTGTCAAGCTCCACCTCATGAGATTGGACGGGTCCCTTTCTATGTAACCTTTTCCAATAGATTTGCTTGTAGTGAAGTTCGGGAATTTGAGTACAAAGAGGGCTATACTAGAAATGTAGATTTGGCAGATTTTGTTAACAGCTCAACTGAAATGCTGCATCATTTGCAACTGGATGAGTTACTTTCTTTGAATTCAGTTCACCCTTCAAATCAAGTTTTTGAGGATGACATGGAGAAAAGGAACTTGATTCTTAAGCTTATTTCACTGAAAGAGGAAGAGGAATATTCGAGTAATGAAGAGCCAACCGTAGAGATGAATATATCAGAATACAGGTTGAACGCACATAAGTTTCACAGGCAGGTTAAGGAGAAGCTGTACTCGTGGCTTCTTCACAAAGTAACTGAAACTGGTAAAGGGCCTCATGTGTTTGGTAAAGATGGGCAAGGTGTGTTACATTTGGTTGCTGCTCTTGGTTATGATTGGGCCATAGCACCAATTGTAACTGCTGGAGTTATTATAAACTTCCGTGATGTGAATGGATGGACAGCTCTACACTGGGCTGCATCCTGTGGCAGAGAGCGAACAGTTGCTCTCCTTGTCTCCATGGGTGCAGCTGCCGGAGCATTGACAGATCCATGTCCAGCATTCCCTTCAGGAAGAACACCTGCAGATCTTGCTTCCAACAATGGCCACAAAGGAATTTCGGGTTTTCTTGCTGAGTCATTATTAACTAGCCACCTTGAATCACTCACAGTGGATGATGTGAATAAAGATGGTACGAAAGAAAATTTGGGAATGAAAGCAGTACAGACATTTTCAGAACGAATTGCAACACCTGTGTTTTGTGGGGATGTACCAGATGCTATCTGCCTTAAGGATTCTCTTGATGCTGTCCGTAATGCTACCCAAGCTGCTGATAGAATACATCAAGTATATAGAATGCAGTCATTTCAAAGGAAACAGTTAGCTCAGTATGAAGATGATGACGAGTTTGGATTGTTAGATCAGCAAGCTCTTTTGCTTCTAGCTTCTAAGGGAAGAAAATCTGGACATGGGGAGGGTTCAGCCAATGCTGCTGCAATACAAATACAGAAAAAATTTCGTGGTTGGACAAAGAGAAAAGAATTCTTGTTCATTCGTCAAAGAGTTGTTAAAATCCAGGTTCATCCAGCTGCTCTCTTTCTTTTAGATTATCTGTTTTTTTATGAATGTTTGTGCTTTTCAGTCCGTTAA 2877 0.4161 MADRGASSYGLTPRLDIQQLQFEAQHRWLRPAEICEILKNYQMFQITPEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEPDMMHIVFVHYLDVKVNKTNIGASTDTNEVTSDSQNGSSVSSGFPANYGNTPSGSTDSMSPTSTLTSLCEDADSEDIHQTSSGFHAFHGSQNLGNGPPMDKIDARSNSSYLTHPLSGGHGQLPISGTNYLPLVQGVKSNPSDITYIEGQRHIIASWDNVVEKSAGSHSDPSLVSTNSIPSSSMENTIEQEQTVFTEVGGASQSLQSNWQIPFEENTGEFPKWSFTQSSSLEFGSDYTTGLLGKENYNGSPETDPGLFSFNYEPEEQSVQQNLSMQHAHGQSQDALTTECDEIHGEQSINYALTMKRVFMDAEESLKKVDSFSRWISKELAAVDDLHMQSSPGVSWGTDECGNVIDETSLNLSLSQDQLFSINDFSPKWAYAESEIEVLIIGTFLKSQPEMATCNWSCMFGEVEVPATVLANGILCCQAPPHEIGRVPFYVTFSNRFACSEVREFEYKEGYTRNVDLADFVNSSTEMLHHLQLDELLSLNSVHPSNQVFEDDMEKRNLILKLISLKEEEEYSSNEEPTVEMNISEYRLNAHKFHRQVKEKLYSWLLHKVTETGKGPHVFGKDGQGVLHLVAALGYDWAIAPIVTAGVIINFRDVNGWTALHWAASCGRERTVALLVSMGAAAGALTDPCPAFPSGRTPADLASNNGHKGISGFLAESLLTSHLESLTVDDVNKDGTKENLGMKAVQTFSERIATPVFCGDVPDAICLKDSLDAVRNATQAADRIHQVYRMQSFQRKQLAQYEDDDEFGLLDQQALLLLASKGRKSGHGEGSANAAAIQIQKKFRGWTKRKEFLFIRQRVVKIQVHPAALFLLDYLFFYECLCFSVR 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01382 958 Gene3D - 656 797 IPR036770 -
Car06g01382 958 Gene3D Immunoglobulins 487 582 IPR013783 -
Car06g01382 958 ProSiteProfiles Ankyrin repeat region circular profile. 727 752 - -
Car06g01382 958 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 10 937 - -
Car06g01382 958 MobiDBLite consensus disorder prediction 148 189 - -
Car06g01382 958 Pfam CG-1 domain 23 136 IPR005559 GO:0003677
Car06g01382 958 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 10 937 - -
Car06g01382 958 SUPERFAMILY Ankyrin repeat 669 787 IPR036770 -
Car06g01382 958 ProSiteProfiles CG-1 DNA-binding domain profile. 17 143 IPR005559 GO:0003677
Car06g01382 958 ProSiteProfiles Ankyrin repeat profile. 727 759 IPR002110 GO:0005515
Car06g01382 958 MobiDBLite consensus disorder prediction 205 232 - -
Car06g01382 958 Pfam IPT/TIG domain 494 573 IPR002909 -
Car06g01382 958 SMART CG_1_2 20 138 IPR005559 GO:0003677
Car06g01382 958 SMART ANK_2a 727 756 IPR002110 GO:0005515
Car06g01382 958 SMART ANK_2a 766 795 IPR002110 GO:0005515
Car06g01382 958 SUPERFAMILY E set domains 494 579 IPR014756 -
Car06g01382 958 Gene3D - 903 937 - -
Car06g01382 958 Pfam Ankyrin repeat 727 752 IPR002110 GO:0005515
Car06g01382 958 ProSiteProfiles IQ motif profile. 904 933 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01382 Car-Chr6 13514481 13523221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01382 1 937 CAMTA Transcription Factor Family AT5G64220 49.947 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Car06g01382 CG-1 7.2e-52 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01382 K21596 - gmx:100795682 1415.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01382 06 13514481 13523221 Car01g00136 01 1050347 1062013 PCT