Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01379 GATTCAACAAGAGAAAATTTCCTACAAATTTTTGAAAGAAAGGTGGAGGAAAGAAATAGACAATTAAAAGAAAGTGGTCGTGAGCTAGCTGTTTCTTGGGCTCTTTGTGCTGTGTGTCTTGTTGGCCATCTCTCCCATTTATTTGCAGCAAAGACACCATGGATCCATGCATTTCATTCTGTCGGGTTTCATCTATCCTTGTGTTTATTTACGTTACTTGGTCCCGGCCGCCGACTTATCCTTGATGGCTTAAAAAGTCTTTTTAAAAGGGTGCCGAACATGAACACATTAGTTGGTCTTGGGGCTTTGTCATCATTCACAGTCAGTTCATTTGCTGTTTTGCTGCCGAAATTGGGTTGGAAGGCGTTTTTTGAGGAGCCTATTATGCTGATTGCTTTTGTCTTGTTGGGAAGGAATCTTGAACAGAGAGCTAAAATTAAAGCAACCAGTGATATGACAGGACTTCTTAGCATATTGCCATCTAAAGCTCGCCTTCTGGTTAATAATGGGGAAACAGAGGCTGCCTCAGTTGTTGAAGTTCCTTCAGACAGTCTTTCTGTTGAAGACCAAATTATCATATTACCTGGAGATCGTATTCCAGCTGACGGAATTGTGAGAGCTGGTAGAAGTACTGTAGATGAATCAAGTTTCACTGGGGAGCCGCTGCCAGTAACAAAAGAACTTGGGAGTGAGGTTGCAGCTGGAAGTATAAATCTTAATGGAACTCTTACAATAGAGGTGCGGAGACCAGGTGGTGAGACTGCTATTGGAGACATTATTCGTCTAGTTGAAGAGGCCCAAAGTAGAGAAGCTCCTGTACAACGGTTGGCTGACAAGGTAGCAGGATACTTCACGTATGGAGTAATGGCAACCTCTGTTACCACATTTACATTTTGGAGTGTGTTTGGCTCACACATTTTACCTGCTGCCGTATATCAAGGAAGTACAGTTTCCCTGGCTTTGCAGCTTGCATGCAGTGTTCTGGTTATTGCTTGTCCATGTGCACTTGGGTTAGCCACACCTACTGCTGTGCTGGTTGGAACTTCTTTGGGGGCTAAAAGAGGATTACTTTTGCGTGGTGGAAACATTCTAGAGAAGTTTGCCATGGTAAATGCTGTGGTGTTTGACAAAACAGGGACCCTCACGATTGGTAAACCTGTTGTGACAAAGATTGTCACTCCTACATGCATAGAAAATGCAAATTCAAGCCAAACTAAAAACAATGCTTTGTCTGATATTGAAGTTCTGAGCTTAGCAGCTGCTGTAGAATCAAATTCAGTACATCCAGTTGGGAAAGCAATTGTGGATGCCGCTCGGGCAGTTAATAGTCATGACGCTAAGGTAGCAAATGAAACATTCCTGGAAGAACCTGGATCCGGTGTTGTTGCAACTGTAAATAACAAAAAGGTTTCAGTTGGGACATTGGAATGGATAACCAGGCATGGAGTTAACAACAGTATACATCAAGAAGTGGAGTATAAAAACCAATCATTTGTCTATGTTGGAGTTGATGATACTTTGGCTGGCGTGATTTATTTTGAAGATGAGATAAGGAAAGATGCAAGACATGTTGTTGACACGCTATCTAAGCAAGATATTGGTGTCTACATGCTGTCTGGAGACAAAAGGAATGCAGCTGAGTATGTTGCATCTCTTGTTGGGATTCCCAAAGAGAAGGTGCTATCTGAAATGAAACCAGAGGAGAAAAACAAGTTCATAAAGGAACTTCAGCAAGATAAGAAAGTTGTAGCTATGGTTGGTGATGGAATTAATGATGCAGCTGCCCTGGCTTCTTCACATATAGGTATTGCATTGGGTGGAGGTGTTGGAGCTGCCAGTGAGGTGTCTTCTATTGTATTGATGCACAACCATCTCTCACAGCTGCTTGATGCTTTGGAGCTTAGCAGGCTAACCATGAATACAGTAAAGCAAAATCTTTGGTGGGCTTTCGTATACAACATTGTAGGGATTCCAATTGCAGCTGGAGTGTTATTTCCTGTAAATGGCACCATGCTGACACCATCAATTGCAGGGGCTCTCATGGGGTTAAGTTCCATTGGTGTAATGACTAACTCATTACTTTTGAGAATCAAGTTTTCCTTAAAGCAAAAACAAATACAGAACTATGTTGAGTCTGATCTGGCTCGCCGAAACCTGAAAATGAAGTAG 2169 0.4219 DSTRENFLQIFERKVEERNRQLKESGRELAVSWALCAVCLVGHLSHLFAAKTPWIHAFHSVGFHLSLCLFTLLGPGRRLILDGLKSLFKRVPNMNTLVGLGALSSFTVSSFAVLLPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLLSILPSKARLLVNNGETEAASVVEVPSDSLSVEDQIIILPGDRIPADGIVRAGRSTVDESSFTGEPLPVTKELGSEVAAGSINLNGTLTIEVRRPGGETAIGDIIRLVEEAQSREAPVQRLADKVAGYFTYGVMATSVTTFTFWSVFGSHILPAAVYQGSTVSLALQLACSVLVIACPCALGLATPTAVLVGTSLGAKRGLLLRGGNILEKFAMVNAVVFDKTGTLTIGKPVVTKIVTPTCIENANSSQTKNNALSDIEVLSLAAAVESNSVHPVGKAIVDAARAVNSHDAKVANETFLEEPGSGVVATVNNKKVSVGTLEWITRHGVNNSIHQEVEYKNQSFVYVGVDDTLAGVIYFEDEIRKDARHVVDTLSKQDIGVYMLSGDKRNAAEYVASLVGIPKEKVLSEMKPEEKNKFIKELQQDKKVVAMVGDGINDAAALASSHIGIALGGGVGAASEVSSIVLMHNHLSQLLDALELSRLTMNTVKQNLWWAFVYNIVGIPIAAGVLFPVNGTMLTPSIAGALMGLSSIGVMTNSLLLRIKFSLKQKQIQNYVESDLARRNLKMK 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01379 722 SUPERFAMILY Calcium ATPase, transduction domain A 176 263 IPR008250 -
Car06g01379 722 ProSitePatterns E1-E2 ATPases phosphorylation site. 376 382 IPR018303 -
Car06g01379 722 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 132 395 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car06g01379 722 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 423 665 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car06g01379 722 SUPERFAMILY Calcium ATPase, transmembrane domain M 128 665 IPR023298 -
Car06g01379 722 CDD P-type_ATPase_Cu-like 27 696 - -
Car06g01379 722 Coils Coil 8 28 - -
Car06g01379 722 Pfam E1-E2 ATPase 158 354 - -
Car06g01379 722 SFLD p-type atpase 357 636 IPR044492 -
Car06g01379 722 SUPERFAMILY HAD-like 373 693 IPR036412 -
Car06g01379 722 PRINTS Copper-transporting ATPase signature 563 580 - -
Car06g01379 722 PRINTS Copper-transporting ATPase signature 79 98 - -
Car06g01379 722 PRINTS Copper-transporting ATPase signature 127 146 - -
Car06g01379 722 PRINTS Copper-transporting ATPase signature 659 673 - -
Car06g01379 722 PRINTS Copper-transporting ATPase signature 357 372 - -
Car06g01379 722 PRINTS P-type cation-transporting ATPase superfamily signature 609 621 - -
Car06g01379 722 PRINTS P-type cation-transporting ATPase superfamily signature 374 388 - -
Car06g01379 722 PRINTS P-type cation-transporting ATPase superfamily signature 509 520 - -
Car06g01379 722 PRINTS P-type cation-transporting ATPase superfamily signature 531 541 - -
Car06g01379 722 PRINTS P-type cation-transporting ATPase superfamily signature 213 227 - -
Car06g01379 722 PRINTS P-type cation-transporting ATPase superfamily signature 586 605 - -
Car06g01379 722 Pfam haloacid dehalogenase-like hydrolase 370 598 - -
Car06g01379 722 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 94 695 IPR027256 GO:0006812|GO:0016021|GO:0019829
Car06g01379 722 Gene3D - 144 267 - -
Car06g01379 722 TIGRFAM ATPase-IB1_Cu: copper-translocating P-type ATPase 76 696 - -
Car06g01379 722 Gene3D - 365 636 IPR023214 -
Car06g01379 722 Gene3D - 385 517 IPR023299 GO:0000166
Car06g01379 722 SFLD C1.7: P-type atpase like 357 636 - -
Car06g01379 722 PANTHER ATP7, ISOFORM B 14 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01379 Car-Chr6 13469020 13481366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01379 76 696 Primary Pumps ATPases AT1G63440 40.094 1.55e-131 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01379 K17686 - gmx:100796210 1186.02