Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01363 ATGGATGCTTCATCATTAACCTCAAGCCTAAGAATTTCCAATTCAAACCAATTTCATTACCTTCCACAACTCTCAAACAAACAACAAAGACCATGTGAAGTGCACTTTACAATTTCATGCAAAGCAACAAAGCTAAAGAATATGGAGGAAACCAAGCATGGATCAAATTTCTACAAAATGTTATCCGTGAATCCAAAAAATGCAACAATGGAAGAGATAAAGAAAGCTTATAGATCAATGGCACTTCAATATCACCCCGATGTGTGTCATGATCCTAACATGAAAGAGGAATCAACGAGGATGTTTGTTCAACTAAACGTAGCTTACAAGACTTTGTCAAATCCTATGCTCCGTGAACAATATGATAGTGAATTGGGTTTGAAAAACAATATGGTTATTAATAATATTGTTAGTGAAGAGATGTGGAGAAGTAGGTGGCAAGAACAAATTGTTGAGTTGAAGAAAAGGTCTCGTAGACGTATGGAACAAAAAGAAGGGTCTTGGGGTAGTAGAATGAGGACACAAAACATGAAAGATAGTTACTAA 546 0.3571 MDASSLTSSLRISNSNQFHYLPQLSNKQQRPCEVHFTISCKATKLKNMEETKHGSNFYKMLSVNPKNATMEEIKKAYRSMALQYHPDVCHDPNMKEESTRMFVQLNVAYKTLSNPMLREQYDSELGLKNNMVINNIVSEEMWRSRWQEQIVELKKRSRRRMEQKEGSWGSRMRTQNMKDSY 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01363 181 PRINTS DnaJ domain signature 59 77 IPR001623 -
Car06g01363 181 PRINTS DnaJ domain signature 77 92 IPR001623 -
Car06g01363 181 PRINTS DnaJ domain signature 97 117 IPR001623 -
Car06g01363 181 ProSiteProfiles dnaJ domain profile. 56 125 IPR001623 -
Car06g01363 181 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 4 179 - -
Car06g01363 181 Gene3D DnaJ domain 43 164 IPR036869 -
Car06g01363 181 MobiDBLite consensus disorder prediction 159 181 - -
Car06g01363 181 Pfam DnaJ domain 56 122 IPR001623 -
Car06g01363 181 CDD DnaJ 56 114 IPR001623 -
Car06g01363 181 SUPERFAMILY Chaperone J-domain 45 121 IPR036869 -
Car06g01363 181 SMART dnaj_3 55 117 IPR001623 -
Car06g01363 181 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 4 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01363 Car-Chr6 13356541 13357471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01363 58 123 C2H2 Transcription Factor Family AT1G74250 39.706 1.62e-06 45.4