Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01356 ATGGGAGATAATAATAACAATGTCAACCTTCCACCAGGTTTTCGTTTTTATCCAACAGATGAAGAGCTTCTTGTCCATTTTCTTCATAGAAAGGCTTCCCTTTTACCTTGTCATCCAGATGTTATCCCTGATCTTGATCTCTTCCCTTATGATCCTTGGGAACTTCATGGTAGAGCTTTAGAAGAGGGAAATCAATGGTACTATTATAGTAGAAGGACACAAAACAGAATCACTAACAATGGTTATTGGATGCCAATGGGAATGGAAGAACAAGTTGTTACAACCTCAACCAATAAGAGACTTGGTATCAAGAAATATTATGTTTTCCATTTGGGACAGACACCTAATGGTAACAAAACCAATTGGATAATGCAAGAGTATCGTCTATCAGATTCTGCCTCCTCTAGCAGATCATCATCATCTAAAAGAAAATCACAACCAAAATCAGAACATAGTAGGTGGGTGATATGTCGAGTTTATGAGAGTGATGATGACGAAGATGGTGATGGAACAGAGCTTTCTTGTTTGGATGAAGTTTTCTTGTCATTGGATGATCTTGATGAAGTAAGCTTGCCAAATTAG 582 0.3763 MGDNNNNVNLPPGFRFYPTDEELLVHFLHRKASLLPCHPDVIPDLDLFPYDPWELHGRALEEGNQWYYYSRRTQNRITNNGYWMPMGMEEQVVTTSTNKRLGIKKYYVFHLGQTPNGNKTNWIMQEYRLSDSASSSRSSSSKRKSQPKSEHSRWVICRVYESDDDEDGDGTELSCLDEVFLSLDDLDEVSLPN 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01356 193 MobiDBLite consensus disorder prediction 133 152 - -
Car06g01356 193 Gene3D NAC domain 19 166 IPR036093 GO:0003677|GO:0006355
Car06g01356 193 ProSiteProfiles NAC domain profile. 10 162 IPR003441 GO:0003677|GO:0006355
Car06g01356 193 PANTHER NAC DOMAIN-CONTAINING PROTEIN 104 7 190 - -
Car06g01356 193 PANTHER NAC TRANSCRIPTION FACTOR 56 7 190 - -
Car06g01356 193 Pfam No apical meristem (NAM) protein 11 129 IPR003441 GO:0003677|GO:0006355
Car06g01356 193 SUPERFAMILY NAC domain 7 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01356 Car-Chr6 13281365 13282757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01356 9 161 NAC Transcription Factor Family AT3G04070 41.463 2.46e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car06g01356 NAM 2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01356 - - gmx:100813096 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01356 06 13281365 13282757 Car06g01356 06 13281365 13282757 ECH
Car06g01356 06 13281365 13282757 Car01g00113 01 896331 897526 PCT