Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01354 ATGCTTAAAGCTCTTATGCCTGTTGCCGTTTACTCCATCGGCGTTCTTTTGAAAAAAGAATCTTACAAAAACGACACCATGTTTAACATGTTATCCATTTCTCTTGGCGTTGGTGTTGCCGCATATGGTGAAGCTAGCTTTTTTCTTCTCAACAATTCATTCACCAGCCGAACTCAACTCAACGCTACAATGGTTAACGTTCCAAAGACAAAGAAAACATACTGCAAAAGCAAGGAATGCAAGAAGCATACCTTACACAAAGTTACCCAATACAAAAAGGGTAAAGATAGCATCGCTGCTCAGGGAAAGCGTCGTTATGATCGCAAACAATCTGGTTATGGTGGTCAGACTAAACCTGTTTTTCACAAAAAGGCCAAAACCACTAAGAAAATTGTCTTGAGGCTTCAGTGTCAAGGTTGCAAACATGTTTCTCAACATGCTATTAAGAGGTGCAAGCACTTTGAGATTGGTGGTGATAAGAAGGGAAAAGGAACGTCTCTATTTTAG 507 0.4004 MLKALMPVAVYSIGVLLKKESYKNDTMFNMLSISLGVGVAAYGEASFFLLNNSFTSRTQLNATMVNVPKTKKTYCKSKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01354 168 ProSitePatterns Ribosomal protein L44e signature. 126 137 IPR000552 GO:0003735|GO:0005840|GO:0006412
Car06g01354 168 MobiDBLite consensus disorder prediction 97 111 - -
Car06g01354 168 PANTHER 60S RIBOSOMAL PROTEIN L44-LIKE 40 168 - -
Car06g01354 168 Gene3D - 64 168 - -
Car06g01354 168 PANTHER 60S RIBOSOMAL PROTEIN L36A/L44 40 168 IPR000552 GO:0003735|GO:0005840|GO:0006412
Car06g01354 168 MobiDBLite consensus disorder prediction 97 119 - -
Car06g01354 168 Pfam Ribosomal protein L44 82 157 IPR000552 GO:0003735|GO:0005840|GO:0006412
Car06g01354 168 SUPERFAMILY Zn-binding ribosomal proteins 65 157 IPR011332 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01354 Car-Chr6 13266164 13268683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01354 64 168 Cytoplasmic Ribosomal Protein Gene Family AT3G23390 92.381 8.44e-68 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01354 K02929 - ini:109159709 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01354 06 13266164 13268683 Car01g00111 01 883036 885694 PCT