Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01349 ATGGCTGTAGGGGCAATTTGTGATTCTGAATCACTGAACCATATAGTTGCAATTCCAAATCCTACAAAGGAAATGGATGAAAACAATAATAATAATGAAGTTGATTATTGGCAAAGAGCACAATGGCTTCGTGCAGCTGTATTAGGAGCTAATGATGGTTTAGTTTCTGTTGCTTCATTAATGATGGGTGTAGGAGCTGTTAAAACAGCTAACACAGCAATGTTAGTGGCTGGTTTTGCAGGATTAGTAGCTGGTGCATGTGGAATGGGAATAGGTGAATTTGTTTCTGTTTACACACAATATGAAGTTGAAATTGGTCAAATGATGAGAGAGTTAGGTACTTGTGATAGAAAAGAGAAGGCATTGGAAATGGAGTTGGAGAAAAGAAGATCATTGCCTAATCCATTACAAGCTGCATTAGCTTCTGCTTTTTCATTTTCTGTTGGTGGTTTGGTTCCTTTACTTTGTGGTTCATTTATAAAAGCTTATAAGATTAGAGTTATTGTCATTGTTGCAATTTCTAGTTTGGCTTTGCTTGTTTTTGGAAGAGTTGGAGCTCAACTTGGTAAGACACCAAAGATTAGATCTTCTATTAGGTTCCTTCTTGGTGGTTGGATGGCTATGGCTATCACATTTGGCTTGACCAAATTATTGGCTCGTTCTAGTGGTTTGGATTTCTAA 681 0.373 MAVGAICDSESLNHIVAIPNPTKEMDENNNNNEVDYWQRAQWLRAAVLGANDGLVSVASLMMGVGAVKTANTAMLVAGFAGLVAGACGMGIGEFVSVYTQYEVEIGQMMRELGTCDRKEKALEMELEKRRSLPNPLQAALASAFSFSVGGLVPLLCGSFIKAYKIRVIVIVAISSLALLVFGRVGAQLGKTPKIRSSIRFLLGGWMAMAITFGLTKLLARSSGLDF 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01349 226 CDD Nodulin-21 41 193 - -
Car06g01349 226 Pfam VIT family 43 119 IPR008217 GO:0005384|GO:0030026
Car06g01349 226 Pfam VIT family 107 215 IPR008217 GO:0005384|GO:0030026
Car06g01349 226 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 219 IPR008217 GO:0005384|GO:0030026
Car06g01349 226 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 1 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01349 Car-Chr6 13203180 13204329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01349 25 224 Nodulin-like Gene Family AT3G43660 57.143 2.20e-77 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01349 K22736 - gmx:100810586 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01349 06 13203180 13204329 Car06g01349 06 13203180 13204329 ECH