Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01346 ATGTGTTGCTATATTCATCCCAAAATACTCTTGTCTATATCTATATACACACACTCCATATTCCAAAGTTGTGCTATACATATTCAACACCTTTCTATTAATAGTAGCACAAAAATACATATCGTGAAGATGAAGGATTTATACAAATCATTGCAAGGAATAAAACCAACCATTCTAATGTTGTTAGTGCAATTTGCATATGCAGCTGCGAATATAGTATACAAACTTGCCATTAATGATGGAATGAGTATGAGAGTGGCTTCCGCTTACCGTCTCATTATTGCGTCGGCTTTCACTGTTCCTCTTGCTCTTTTCTTTGATAGGAAGAAGAGGCCAAAGATTACTTGGAAGGTTCTTTATCTAGCATTTCTCTCTGGATTGTTTGGGGGAACCTTATTTCTAAACCTTTATGGCATTGGCTTGGATTTGACTTCAGCAACGTTTATGATGTGCATGGCCAACCTTGTTCCAGGAATTACCTTCATCATGGCCATTTTCTCCAGATTGGAAAAGCTAAATTGGGGAGTAGTGGAGGGAAAAGTGAAGATATTAGGGACAATAATTAGCATTAGTGGGGCAATGCTAATGACATTTTACAAAGGAGTAGAAATTAATATTTGGTCTTCAAATGTGAACCTTATGCATCCACATAAGAACCAAAATGGGGTTATGGAACCGAAACATGTCGACTTTCGTAATAATATAGTGGGTGTTCCATGTGCCATAGGAAGCATTTCCTCTTTTTCTTTGTGGTTAATCATCCAGGCTAAGTTGAATGAAGAATATCCAAGTCATCATTCATGCTCAGCATTGATGTGCATAATGGGAGCAATACAATCAATTGTTGTTGCTCTTTGTGTCGATAGAGATTGGATCCAATGGAAACTCGGCTACGATATCAGGCTTCTCGCTATGGCTTATGCGGGAATTGTACCTTCTGGAATAGTGGTTATTGTTTTGGCTTGGTGCATAAGGATGAGAGGTCCACTATATGCGTCTATTTTCAATCCTCTCCAACTTTTAATTGTGGTGATCGCTGCATATTTGTTGTTGGATGAAAAATTATATTTAGGAAGTGTCTTCGGAGCAATTTTGATTGTGTGCGGTCTTTATACGGTGCTTTGGAGTAAGAGCCAAGAACTAAAAAAGAAGAGTCAATTAATGCCATTAGAAACCATCCAAAGCAACAAAATTCAAACTAGTACTAGTGGAAATGTTGTCAATTATCATGAAAATGGCAACAAGGGAAATACAAATTCTATTCAATCATAA 1272 0.3726 MCCYIHPKILLSISIYTHSIFQSCAIHIQHLSINSSTKIHIVKMKDLYKSLQGIKPTILMLLVQFAYAAANIVYKLAINDGMSMRVASAYRLIIASAFTVPLALFFDRKKRPKITWKVLYLAFLSGLFGGTLFLNLYGIGLDLTSATFMMCMANLVPGITFIMAIFSRLEKLNWGVVEGKVKILGTIISISGAMLMTFYKGVEINIWSSNVNLMHPHKNQNGVMEPKHVDFRNNIVGVPCAIGSISSFSLWLIIQAKLNEEYPSHHSCSALMCIMGAIQSIVVALCVDRDWIQWKLGYDIRLLAMAYAGIVPSGIVVIVLAWCIRMRGPLYASIFNPLQLLIVVIAAYLLLDEKLYLGSVFGAILIVCGLYTVLWSKSQELKKKSQLMPLETIQSNKIQTSTSGNVVNYHENGNKGNTNSIQS 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01346 423 SUPERFAMILY Multidrug resistance efflux transporter EmrE 90 198 - -
Car06g01346 423 PANTHER WAT1-RELATED PROTEIN 52 398 IPR030184 GO:0016021|GO:0022857
Car06g01346 423 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 52 398 - -
Car06g01346 423 Pfam EamA-like transporter family 237 374 IPR000620 GO:0016020|GO:0016021
Car06g01346 423 Pfam EamA-like transporter family 56 197 IPR000620 GO:0016020|GO:0016021
Car06g01346 423 SUPERFAMILY Multidrug resistance efflux transporter EmrE 294 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01346 Car-Chr6 13165093 13169452 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01346 54 397 Nodulin-like Gene Family AT1G25270 42.151 1.59e-91 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01346 - - cam:101515687 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01346 06 13165093 13169452 Car01g00101 01 822556 825749 PCT