Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01345 ATGGTTAAATTATTGGATGTTAAAGCCATAGAGAGTACAAAGCCTATTGTGTTGATGATAGTGGTCCAGTCTATATATGCAGTGGTGAATGTCATGTTTAAGATGGTAGCAAATGAGGGATCAAATTTAAGTGTTCTTGTTGCCTACCGTTACGTCATTTCTTCTGCCATCACTTTGCCAATTGCTCTCTTCTTTGAAAGGAATAGTCTGCGAAACCTGAGTGGAAAGGTGATGTTCCAAGCTTTTCTTTGTGGGTTATTTGGGGGATCCTTGCAACAAAACCTGTATCTGAAATCTTTGGCTTTGGTACCAGCAACATATACTACAACCATGTTAAACCTCATCCCTGCAACTACCTACGTTATTGCTGTCTCTCTTAGAATGGAGAAGCCAAATCTTGGAACATTAGGTGGCAAGGCCAAATTGATAGGAACATTTGGTGGAATTGGTGGTGCCATGATCCTCACTCTATATGAAGGCAAGAGGTTATTTAACTGGTCAATGCACATTGACTTATTGCAACGATATAAGACATTACCACTACATGATTCTTCTACTGCCTCTCATGTTTTGGGTTTCATGCTAGCTTTTCTCACTTCTCTCTCTTTCTCATTGTGGTTTATAACTCAGTCAAAGATGAGTCAGAATTTTCCGTGGCATTATTCAATCGCGGCTTTAACCTCAATAATGGCTGCAATTCAATCTATTGTATTTGTTCTTTGTACGGAGAGAGATTGGAACCAATGGAAACTTGATTGGAATTTGGGATTTTTAACCTCAGCTTTATCGGGTGTATTTTCCTCTGGGCTGTGCTTTATTCTAATAGCTTGGTGTGTGCGTTTGAAAGGACCTTTGTTTGTGTCTGCTTTTAATCCTCTAATGCTTGTGCTTGTGGTTCTTATTGCATCATTCATATTGGATGAGTATATTACAATTGGAAGTCTAATAGGAGGCGTGTTGATTGTGTGTGGATTGTATTTGATATTATGGGGTAAAAGCAGAGAAGCAAGGGATGTGGATAATATGAACGGGAATGAGATACTATCTACAAAAGACTCTGTTCAATGCGATTCTAATCACATTGCTAACTCATCTTTGACTTGCATCCAAAACGACCATGACAAGAATATTGCAAATGCTGCTCATAATGTATCATTAGATGGCAACACTACTTGA 1176 0.3869 MVKLLDVKAIESTKPIVLMIVVQSIYAVVNVMFKMVANEGSNLSVLVAYRYVISSAITLPIALFFERNSLRNLSGKVMFQAFLCGLFGGSLQQNLYLKSLALVPATYTTTMLNLIPATTYVIAVSLRMEKPNLGTLGGKAKLIGTFGGIGGAMILTLYEGKRLFNWSMHIDLLQRYKTLPLHDSSTASHVLGFMLAFLTSLSFSLWFITQSKMSQNFPWHYSIAALTSIMAAIQSIVFVLCTERDWNQWKLDWNLGFLTSALSGVFSSGLCFILIAWCVRLKGPLFVSAFNPLMLVLVVLIASFILDEYITIGSLIGGVLIVCGLYLILWGKSREARDVDNMNGNEILSTKDSVQCDSNHIANSSLTCIQNDHDKNIANAAHNVSLDGNTT 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01345 391 PANTHER WAT1-RELATED PROTEIN 13 372 - -
Car06g01345 391 Pfam EamA-like transporter family 14 138 IPR000620 GO:0016020|GO:0016021
Car06g01345 391 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020|GO:0016021
Car06g01345 391 PANTHER WAT1-RELATED PROTEIN 13 372 IPR030184 GO:0016021|GO:0022857
Car06g01345 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 334 - -
Car06g01345 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01345 Car-Chr6 13135396 13138272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01345 14 363 Nodulin-like Gene Family AT1G25270 34.659 1.51e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01345 - - mtr:MTR_4g094360 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01345 06 13135396 13138272 Car01g00100 01 808431 811463 PCT