Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01338 atggacgaaattctcaagaacatttaccctgccgccatacaacaatatcaacaacaacaacttattaaaaaacaacagcttcttcaacgacaacagattcttcaacaacagcaacttcttcaacaacaacaacttcttcaacaacaccaacaatttgaacaccaacaatttcttcttcaacaacatcaatttgaagaacaacaatttattcagcattttgaagaacaacaatttattcaacaccgacaactatttgaagaacaacaatttattcaacaacaacaatttgaagaacaacaatttattcaacaacaacaacaatttgaacagcaacaatttgaacaacaacaatttgaacaatttgaacaacaaagacttcaccaacaacaatatgaagaaaaacttcaacaacaatatcaacaacccttcttcaccgacaccaTCGACAATGTATGGAACGACGTCATTCCCAGTGTCGCGACAACTACGTACCAACACCGCCACCACCAATACCATAATCTTGATCATACTTTCGATGAAGGTTTCATCGCATCCGCCGTAGATGATGCGACTATTGAAGATTTCTTGGGCAAATCTGGCGTGGTTCCTATTCCCACTGAAGAACCTTCTCATGAAGTGACATTGGGAAAACGAAAGGCTTCCGAGGAAATTCTTGAGATTGATAAAGCCGCTCTTGCGAGACAGAAAAGATTGATCAAGAATCGTGAGTCCGCTGCTAAGTCCAGAGCAAAAAAGGAGAGATATGTTAGTGGTCTTGAGGACCTGGTTAAGAAACTGGAGATAGAGAATAAGCAGTTATTTGAAGAACAGACTGAAAGGAAAATGGAGAGGCTCAAGCAACTCCGTGAGTGCATCATTCCAATTACGGAACAGCCAAGACCAAAACCGAAACTGAGGAGAACGAGTTCATTGTGA 936 0.235 MDEILKNIYPAAIQQYQQQQLIKKQQLLQRQQILQQQQLLQQQQLLQQHQQFEHQQFLLQQHQFEEQQFIQHFEEQQFIQHRQLFEEQQFIQQQQFEEQQFIQQQQQFEQQQFEQQQFEQFEQQRLHQQQYEEKLQQQYQQPFFTDTIDNVWNDVIPSVATTTYQHRHHQYHNLDHTFDEGFIASAVDDATIEDFLGKSGVVPIPTEEPSHEVTLGKRKASEEILEIDKAALARQKRLIKNRESAAKSRAKKERYVSGLEDLVKKLEIENKQLFEEQTERKMERLKQLRECIIPITEQPRPKPKLRRTSSL 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01338 311 Gene3D - 233 291 - -
Car06g01338 311 PRINTS cAMP response element binding (CREB) protein signature 156 171 - -
Car06g01338 311 PRINTS cAMP response element binding (CREB) protein signature 228 244 - -
Car06g01338 311 PRINTS cAMP response element binding (CREB) protein signature 246 266 - -
Car06g01338 311 PRINTS cAMP response element binding (CREB) protein signature 266 283 - -
Car06g01338 311 SUPERFAMILY Leucine zipper domain 234 281 IPR046347 GO:0003700|GO:0006355
Car06g01338 311 PANTHER OS05G0437700 PROTEIN 113 310 - -
Car06g01338 311 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 231 283 IPR004827 GO:0003700|GO:0006355
Car06g01338 311 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 236 251 IPR004827 GO:0003700|GO:0006355
Car06g01338 311 Coils Coil 256 279 - -
Car06g01338 311 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 113 310 IPR043452 GO:0003700|GO:0045893
Car06g01338 311 Pfam bZIP transcription factor 230 281 IPR004827 GO:0003700|GO:0006355
Car06g01338 311 SMART brlzneu 229 291 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01338 Car-Chr6 13102856 13105634 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01338 188 311 bZIP Transcription Factor Family AT1G03970 41.250 2.68e-19 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car06g01338 bZIP_1 2.5e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01338 K14432 - cam:101514708 375.555