Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01330 ATGGATAGAGGTAAAGAACACAAAAAGATGGAAGTTGATCTCTCTTTGAAGATAGATAGTAATGATGAGCAAGAAGTAGAAGAAGCAAAGGTAGATCATGAACATGTGATGAAAGAGGATGACAAGGAAGAAGTACATGAAACCACAGCTGGAGAAATTGAAGATGATGCATCAATCATACAATTTTCTTTGCAAGATAACACAAAAACAAAAGAGTTAAGTGACTTACAAATAGAGATGGAAAGTATGAAAGAGGAAAACAAAGTACTAAGGAAAGTGGTGGAACAAACAATGAAAGACTACTATGATCTACAAACCAAATTCTCAATCATCCAAGAAaataataataacaataataataataataaAAGAAAGGATCATCAACTTTCTCTCTCACTACAAGACAATAATGCAAGCACAAGTGGTGAAGGACCATCAAGAATTCATGACATGTTTAGTACTAAAAAAATTCAAAGAGTGTCATCTCTTGTACCAAACAATAATACTCATGATAGTATAAGTGAGAGTGAATTGAGTTTGTCATTGAGGTTGCAAACAAGCACTTCTCAGAAAGATCCTGAAGAAAAAAAGGAACAGTTGGCAAGTTTTGAATCAGTGCAGAATAAATTACAAAGGGTACATGACTTGCCTGGTATTATGAATCATGTTGCTTCTCCTCCTAATAGAAAGGCTAGGGTTTCTGTTAGAGCAAGATGTGAAACTGCCACAATGAATGATGGATGTCAATGGAGAAAATATGGACAAAAAATTGCAAAAGGAAATCCGTGTCCGCGAGCCTACTATCGTTGTACCGTAGCTCCAGGATGTCCGGTTAGAAAACAGGTGCAAAGATGCATAGATGACATGTCTATACTAATTACAACCTATGAAGGAACACATAACCATCCTTTGCCTGTTGGTgcaacagcaatggcttcaacagcatcagcagcagcatcaTTCATGTTACTAGAATCAAGTAATCCATTAATTTCAAATGGTTTCACTACTCAACAACAATCCTTTAACCCTTATTACAATACCTTCCACCACCCATTAAACCCATCTTCAAATATTAGAAGCATAGACCCCAATGATCCATCTCAAGGAATTGTTCTTGACCTCACAAATAACAATAATCTCAACGAACCGCCGCGACGTTTTTCGACTGGTAGTAGCTCCTCCAACACAACTGCTTTTTCTTGGATGCCAAATAAGTTTCAAAATAGTAGTAGTGCCATTGCAATGAACAACAATTTTCAAAACCCTAGAGTACCATTGGAGAATATTAATATTTGGAAAGGAGAAGAAAATAAGACAGTAGataataataataataataataatGTGTCTGCAATTGCATCAGATCCTAAGTTTAGGCTTGCTGTTGCAGCTGCCATTACATCACTCATGAATAAAGACAGCCACACTACTAATGGTGGCCAAAATGGTAAGCATGTTTGA 1464 0.3463 MDRGKEHKKMEVDLSLKIDSNDEQEVEEAKVDHEHVMKEDDKEEVHETTAGEIEDDASIIQFSLQDNTKTKELSDLQIEMESMKEENKVLRKVVEQTMKDYYDLQTKFSIIQENNNNNNNNNKRKDHQLSLSLQDNNASTSGEGPSRIHDMFSTKKIQRVSSLVPNNNTHDSISESELSLSLRLQTSTSQKDPEEKKEQLASFESVQNKLQRVHDLPGIMNHVASPPNRKARVSVRARCETATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASTASAAASFMLLESSNPLISNGFTTQQQSFNPYYNTFHHPLNPSSNIRSIDPNDPSQGIVLDLTNNNNLNEPPRRFSTGSSSSNTTAFSWMPNKFQNSSSAIAMNNNFQNPRVPLENINIWKGEENKTVDNNNNNNNVSAIASDPKFRLAVAAAITSLMNKDSHTTNGGQNGKHV 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01330 487 SMART WRKY_cls 244 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g01330 487 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 11 479 IPR044810 GO:0003700
Car06g01330 487 Pfam WRKY DNA -binding domain 245 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g01330 487 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 11 479 - -
Car06g01330 487 SUPERFAMILY WRKY DNA-binding domain 237 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g01330 487 Coils Coil 66 100 - -
Car06g01330 487 Gene3D WRKY domain 229 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g01330 487 ProSiteProfiles WRKY domain profile. 239 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01330 Car-Chr6 13045988 13048705 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01330 28 370 WRKY Transcription Factor Family AT1G68150 47.592 3.53e-85 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car06g01330 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01330 - - gmx:100820209 581.637