Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01329 ATGGAATGGATGCGAAAGACAAAGACGAAGAAGCCGCCTCGTTTAGAGCGCTTGAACGCCAAAAAGAACATCAATTACCGACTCCCTATCATCCCCACCATCCCTTCTCCAACTCCTTCTCCCCCCCACCAAGAATCTAGTCTCCGTGTCATGGGAATCGACGGTGAATTCGACCGTATTTTTCAAAGTTTGGGCCTTTCTGGCCCTGAAGACTTTGCTATCCCAGCCCAAGATTGGGAAGCCCGAAAGGCTCGCTCTCTTCTTTCACTTTCACTTCCTGATCCTGACCCTGTGTCTCTTGTTGTTGATTATCCTTCTTCTTCGGGTGAACACGATGTTGTTGATCGACTTAGAAACGGTGAAAGGAGTGTGCTTTTTACTGATTCGGGTTCTTTCAGTACTTCTCATGATTATGATAGTGAtggtgctggtgctggtgctggtgctACTGCTGCTGCTGCTGAGAGGACTTTGTTTCCTTATGGCTGGTTGAAGCCCACTTTTTCTTCGTGGCAAAAAGGTGCCCTTTTGGGAAAGGGTTCTTTTGGAACTGTTTATGAATGCTACACTGACGATGCATTTTTTTTTGCGGTGAAAGAGGTGTCTTTGCTGGATGATGGTAGCAGCCAAGGAAAACAGAGCATTTTCCAACTTCAGCAGGAAATATCTCTATTGAGTCAGTTTCAACACGATAACATAGTTCGATATTACGGCTCAGAAAAGAATGAAAGCACTCTGTATATATTCCTTGAGCTTGTGTCAAAAGGGTCATTGTCCAGTCTTTATCAACACTACCGCCTAAATGATTCTCAAGTTTCTGCATACACAAGACATATTTTAAATGGCTTGAAGTATCTTCATGAACGTGGTGTGGTGCACAGGGATATCAAGTGTGCTAATATACTGGTTGATGTAAGTGGGTCGGTCAAGCTTGCAGATTTTGGGTTGGCAAAGGCAACAAAAATGAATGACGTTAAATCAAGCAAAGGCTCCCCATACTGGATGGCTCCTGAGGTTGTTAACTTGAGGAGCCAAGGTTATGGGCTTGCAGCCGATATATGGAGCTTAGGGTGTACTGTTTTAGAGATGTTGACAAGGCAGCCACCTTACTTTGATTTAGAAGGAATGCAAGCAATATTTCGGATTGGCAGGGGCGAACCCCCACCCATTCCTGAATCTCTATCTGAAGATGCCCAAGATTTCATTCTCAAATGCTTACAAGTTAACCCAAATGAGCGTCCAACTGCAGCTCAGCTATTGGATCATCCATTTCTAAGGAGACGATTAAGTTCAGCTTCCCCAAGTATTAATAATCTCGTTACGCCTTAA 1329 0.4312 MEWMRKTKTKKPPRLERLNAKKNINYRLPIIPTIPSPTPSPPHQESSLRVMGIDGEFDRIFQSLGLSGPEDFAIPAQDWEARKARSLLSLSLPDPDPVSLVVDYPSSSGEHDVVDRLRNGERSVLFTDSGSFSTSHDYDSDGAGAGAGATAAAAERTLFPYGWLKPTFSSWQKGALLGKGSFGTVYECYTDDAFFFAVKEVSLLDDGSSQGKQSIFQLQQEISLLSQFQHDNIVRYYGSEKNESTLYIFLELVSKGSLSSLYQHYRLNDSQVSAYTRHILNGLKYLHERGVVHRDIKCANILVDVSGSVKLADFGLAKATKMNDVKSSKGSPYWMAPEVVNLRSQGYGLAADIWSLGCTVLEMLTRQPPYFDLEGMQAIFRIGRGEPPPIPESLSEDAQDFILKCLQVNPNERPTAAQLLDHPFLRRRLSSASPSINNLVTP 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01329 442 Pfam Protein kinase domain 172 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01329 442 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 4 430 - -
Car06g01329 442 PANTHER BNAA02G34600D PROTEIN 4 430 - -
Car06g01329 442 PRINTS Tyrosine kinase catalytic domain signature 250 263 IPR001245 GO:0004672|GO:0006468
Car06g01329 442 PRINTS Tyrosine kinase catalytic domain signature 285 303 IPR001245 GO:0004672|GO:0006468
Car06g01329 442 PRINTS Tyrosine kinase catalytic domain signature 351 373 IPR001245 GO:0004672|GO:0006468
Car06g01329 442 PRINTS Tyrosine kinase catalytic domain signature 394 416 IPR001245 GO:0004672|GO:0006468
Car06g01329 442 SMART serkin_6 171 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01329 442 Gene3D Transferase(Phosphotransferase) domain 1 169 439 - -
Car06g01329 442 SUPERFAMILY Protein kinase-like (PK-like) 156 431 IPR011009 -
Car06g01329 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
Car06g01329 442 ProSiteProfiles Protein kinase domain profile. 171 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01329 442 ProSitePatterns Protein kinases ATP-binding region signature. 177 199 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01329 Car-Chr6 13032887 13037074 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01329 14 86 MAP Kinase Kinase Kinase AT4G08500 42.857 4.35e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Car06g01329 Pkinase 7.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01329 - K13414 gmx:100820552 569.311