Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01314 ATGGTGACTTTCTCGGTCGGTGGCTCCGACGACGGGGAAGGTCCTAGCAACCCAAACAACAAGCGACGAAGGGTAGACGACGGCgaagaagaagaaacaacagcagcagcagtagaaggagaacaacaagaaAACCGACAACCACAAGAAGGGTTCGAAATGGAAACCCCTCCGATCGGAACCGTAGAAAACGAAGGAAATGAACTAACCTCTGGATCCAACGGTTACGACGTTGGTAAGAACGTATCTGCCATCATTTCCGACCCTGATGTTCTCGATTGCTTCATTTGCTCTGAACCATTAACAATTCCTATTTTTCAGTGTGAGAATGGGCATATTGCTTGTTCTAATTGCTGTTCCCAACTTAGGAACAAGTGTCCCATGTGCTTAATGCCCATTGGATACAACCGTTGTCGGGCTATGGAGAAGTTGCTGGAATCTATTAAAATATCATGCCCGTGTGCAAAATATGGCTGTAAAGAGATGTTTAGTTGCAGTATGAAAAGTAGCCACGAGAAGGAATGCACATATATACCATGTAAATGTCCACACACAGGTTGTGGCTTTCTCGCCTCATCCAAGGAGTTAGCCCTCCATTTCAGCCATAGGCATGTAGGCTTTGGAGTACAATTTACATATGACAAATTTATATCTGTCGTCTTAAATACTGGACAAAAAGAAATTGTTCTTCTAGATCAAAATGATGCTAGACTATTTATTGTTCACAATAACCTTGTGGATTTGGGAAATATGGTCCATATTAGCTGCCTTGGCCCCAAAGCAATGGCTGGTTTTCATTATGATGTTTTGGCTAGGTCTCAAGGAAGCACTTTAATCTTGCAATCTTCTACCAAGACCATTCAAGACAATAATGGTGGTGCTCCCAGAACTGGGTTCCTTTTGATTCCTTCTGACTATTTTGGTTTTGGACAACTCAAACTGGATATTCGTATAAAGTCTCACTAA 966 0.4037 MVTFSVGGSDDGEGPSNPNNKRRRVDDGEEEETTAAAVEGEQQENRQPQEGFEMETPPIGTVENEGNELTSGSNGYDVGKNVSAIISDPDVLDCFICSEPLTIPIFQCENGHIACSNCCSQLRNKCPMCLMPIGYNRCRAMEKLLESIKISCPCAKYGCKEMFSCSMKSSHEKECTYIPCKCPHTGCGFLASSKELALHFSHRHVGFGVQFTYDKFISVVLNTGQKEIVLLDQNDARLFIVHNNLVDLGNMVHISCLGPKAMAGFHYDVLARSQGSTLILQSSTKTIQDNNGGAPRTGFLLIPSDYFGFGQLKLDIRIKSH 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01314 321 MobiDBLite consensus disorder prediction 16 31 - -
Car06g01314 321 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 23 320 IPR044286 -
Car06g01314 321 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 142 200 IPR013083 -
Car06g01314 321 ProSiteProfiles Zinc finger RING-type profile. 94 129 IPR001841 -
Car06g01314 321 SUPERFAMILY TRAF domain-like 147 318 - -
Car06g01314 321 MobiDBLite consensus disorder prediction 1 15 - -
Car06g01314 321 MobiDBLite consensus disorder prediction 1 74 - -
Car06g01314 321 ProSiteProfiles Zinc finger SIAH-type profile. 147 205 IPR013010 GO:0008270
Car06g01314 321 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 23 320 - -
Car06g01314 321 Pfam Seven in absentia protein family 137 290 IPR018121 GO:0005737|GO:0006511|GO:0007275
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01314 90 318 C3H Transcription Factor Family AT2G41980 26.423 4.99e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01314 K04506 - gmx:100778869 394.815