Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01302 ATGCTTTCCTTCCCTTCTCATCTCTCAACACCTTTTATTTGTCGTCAAGTTTGGAACTCAGCAAAGAGAATATTATCCATCAATCAAACAAATATCATGAAGGCTTATTCTAACTTGCATAAGAGAAAGTCTACTTTGACAGCTGGTGTAAATCCTGCTGCTTTTAAGACATCAAGGAAGGAAAGCTATGTGGACTCACTTGAAAGAAAGCAGGAAGATGATCTCATTATTAGAGAAGAAAAATATAGTGAGGATGAGGATGACATCAATACCAGTGACAACAACAATGAAGAAAAATCTGGAGGAGATGATGATGTGGTTGAGGATCATCAAGAGGAAGGAGAGTACTTACTAGGTAATGACGGTCCTACTACGGTTTCAGAGGACAGAGTTCACAAAAGTCTGTTCATGAAAGACACAGACGAGAAGAATAAGCCTCATACTCGACATTTCAGCCACGGATGTCACTTAGTTGAAGGAGAGATGAACCATGGAATGGAGGACTATGTTTTTGCTCAACACAGGAAGCTCAATGGTTATGATTTAGGACTGTACGCAATTTTTGATGGACACTCAGGTCGCGATGTTGCAAAATATTTGCAAAGCCATCTATTTGAAAATATACTGAGTGAGCCCGATTTCTGGGAAAATCCAGTGCATGCTGTTAAGAAAGCATGTAAAGCGACAGACGATGAGATTTTAGAGAACTTAGCTGATTCGCGTGGAGGATCAACGGCTGTGGCAGCAATACTAATTAATGGTGTTAAGCTGGTGGTAGTCAATGTTGGCGATTCTCGAGCAATATCATGTAAAAATGGTCTTGCCAAACAACTTACTGTGGATCATGAACCAGAAAAGGAAAAAGAACTGGTTGAGAGTAGGGAGGTTTTGTGTCAATGA 900 0.4011 MLSFPSHLSTPFICRQVWNSAKRILSINQTNIMKAYSNLHKRKSTLTAGVNPAAFKTSRKESYVDSLERKQEDDLIIREEKYSEDEDDINTSDNNNEEKSGGDDDVVEDHQEEGEYLLGNDGPTTVSEDRVHKSLFMKDTDEKNKPHTRHFSHGCHLVEGEMNHGMEDYVFAQHRKLNGYDLGLYAIFDGHSGRDVAKYLQSHLFENILSEPDFWENPVHAVKKACKATDDEILENLADSRGGSTAVAAILINGVKLVVVNVGDSRAISCKNGLAKQLTVDHEPEKEKELVESREVLCQ 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01302 299 SMART PP2C_4 142 299 IPR001932 -
Car06g01302 299 Gene3D - 133 295 IPR036457 -
Car06g01302 299 SUPERFAMILY PP2C-like 149 290 IPR036457 -
Car06g01302 299 CDD PP2Cc 151 290 IPR001932 -
Car06g01302 299 ProSiteProfiles PPM-type phosphatase domain profile. 152 299 IPR001932 -
Car06g01302 299 Pfam Protein phosphatase 2C 164 290 IPR001932 -
Car06g01302 299 MobiDBLite consensus disorder prediction 75 106 - -
Car06g01302 299 PANTHER PROTEIN PHOSPHATASE 2C 28-RELATED 94 295 - -
Car06g01302 299 PANTHER ALPHABET, ISOFORM E-RELATED 94 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01302 Car-Chr6 12844165 12848704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01302 149 294 PP2C-type Phosphatase Gene Family AT2G34740 63.265 2.14e-64 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01302 - - gmx:100814772 394.815