Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01296 ATGTCTGATGAACCTAAACAAGCTAACTACCAAAACTTTATGGTAGATCATAATATTAATTACCATCAAGGTAACATGTATTGTGAAAAACAATTTTCCAGCTTTCCTAATTTAGCTTCATCAGCATATGATTCATCACAACCTACTTTTGATCCTTCCTATATGAGTTTTAGTGAATGTTTACAAGGTGGATCAATGGATCATTACAATTCATCATCACTTGGAAATTGTTTTGGAGTAGTATCTCCTTCTTCATCAGAAGTTTTTTCATGTGTTGAAGGAAATACTACTAATAAAAAAGCATCTGTTGCAACGGATCAAACCCTCGGTGCTACACTTAACTCATGTATCTCTTCCTCATCTTCTGAAGCTGGCGGAGGAGCAGCTTCAGAAGAAGATTCAGGAAAGAGAAAACATGTTATTAAAGAAGAAGGACAAGAAAGCTCTAAAAATGAgaagaaggataagaagaaattaggagagaagaagaaagagaaAgaaccaagatttgctttcatgacaaagagtgaagttgatcaacttgaagatggatacagatggagaaaatatggacaaaaagctgttaagaatagtccataccctaggagctattacaggtgtacaacacagaagtgtacagtgaagaaacgcgtagagagatcttttgaagacccaacaactgtcataacaacatatgaaggtcaacataatcatccTGTCCCTACATCTCTTAGAGGCAATGCTGCAGCTGCTATCATGTTCACACCCTCCTCTTTGCTATCTACACCTTCTTCTAATTCAAACTTCTCTCAAGATCTCCTTCTTCACATGCATTCTCATCACAACACCTTCAATATCACTTCTCAACCATCACCTCATTCTAATTCTAATTCTTCACACAACAACTCTCTTCTTCATCATTATCAACATCATCGTGACTATGGCCTCCTTCAAGACATTGTCCCTTCTATGTTCCTCAATAGGACCAACCACAGCTGA 999 0.2753 MSDEPKQANYQNFMVDHNINYHQGNMYCEKQFSSFPNLASSAYDSSQPTFDPSYMSFSECLQGGSMDHYNSSSLGNCFGVVSPSSSEVFSCVEGNTTNKKASVATDQTLGATLNSCISSSSSEAGGGAASEEDSGKRKHVIKEEGQESSKNEKKDKKKLGEKKKEKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFEDPTTVITTYEGQHNHPVPTSLRGNAAAAIMFTPSSLLSTPSSNSNFSQDLLLHMHSHHNTFNITSQPSPHSNSNSSHNNSLLHHYQHHRDYGLLQDIVPSMFLNRTNHS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01296 332 Pfam WRKY DNA -binding domain 182 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g01296 332 Gene3D WRKY domain 165 242 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g01296 332 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 325 IPR044810 GO:0003700
Car06g01296 332 MobiDBLite consensus disorder prediction 118 171 - -
Car06g01296 332 SUPERFAMILY WRKY DNA-binding domain 173 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g01296 332 MobiDBLite consensus disorder prediction 130 171 - -
Car06g01296 332 MobiDBLite consensus disorder prediction 283 303 - -
Car06g01296 332 PANTHER WRKY TRANSCRIPTION FACTOR 81 1 325 - -
Car06g01296 332 SMART WRKY_cls 181 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g01296 332 ProSiteProfiles WRKY domain profile. 176 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01296 Car-Chr6 12772870 12774462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01296 20 326 WRKY Transcription Factor Family AT4G18170 42.857 3.45e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car06g01296 WRKY 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01296 - - cam:101497541 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01296 06 12772870 12774462 Car06g01296 06 12772870 12774462 ECH